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Results: 1 to 20 of 275

1.

InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale.

Wang H, Segal E, Ben-Hur A, Li QR, Vidal M, Koller D.

Genome Biol. 2007;8(9):R192.

PMID:
17868464
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Filtering high-throughput protein-protein interaction data using a combination of genomic features.

Patil A, Nakamura H.

BMC Bioinformatics. 2005 Apr 18;6:100.

PMID:
15833142
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Computational verification of protein-protein interactions by orthologous co-expression.

Tirosh I, Barkai N.

BMC Bioinformatics. 2005 Mar 2;6:40.

PMID:
15740634
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A computational approach for ordering signal transduction pathway components from genomics and proteomics Data.

Liu Y, Zhao H.

BMC Bioinformatics. 2004 Oct 25;5:158.

PMID:
15504238
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Automated yeast two-hybrid screening for nuclear receptor-interacting proteins.

Albers M, Kranz H, Kober I, Kaiser C, Klink M, Suckow J, Kern R, Koegl M.

Mol Cell Proteomics. 2005 Feb;4(2):205-13. Epub 2004 Dec 15.

PMID:
15604093
[PubMed - indexed for MEDLINE]
Free Article
6.

The Cartographers toolbox: building bigger and better human protein interaction networks.

Sanderson CM.

Brief Funct Genomic Proteomic. 2009 Jan;8(1):1-11. doi: 10.1093/bfgp/elp003. Epub 2009 Mar 12. Review.

PMID:
19282470
[PubMed - indexed for MEDLINE]
Free Article
7.

Inferring protein-protein interaction networks from protein complex data.

Martin S, Mao Z, Chan LS, Rasheed S.

Int J Bioinform Res Appl. 2007;3(4):480-92.

PMID:
18048314
[PubMed - indexed for MEDLINE]
8.

Proteomics. Integrating interactomes.

Gerstein M, Lan N, Jansen R.

Science. 2002 Jan 11;295(5553):284-7. No abstract available.

PMID:
11786630
[PubMed - indexed for MEDLINE]
9.

Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale.

Li H, Li J, Wong L.

Bioinformatics. 2006 Apr 15;22(8):989-96. Epub 2006 Jan 29.

PMID:
16446278
[PubMed - indexed for MEDLINE]
Free Article
10.

Data mining in protein interactomics. Six computational research challenges and opportunities.

Chen JY, Sivachenko AY.

IEEE Eng Med Biol Mag. 2005 May-Jun;24(3):95-102. No abstract available.

PMID:
15971847
[PubMed - indexed for MEDLINE]
11.

Computational prediction of protein-protein interactions.

Obenauer JC, Yaffe MB.

Methods Mol Biol. 2004;261:445-68. Review.

PMID:
15064475
[PubMed - indexed for MEDLINE]
12.

Computational analyses of high-throughput protein-protein interaction data.

Chen Y, Xu D.

Curr Protein Pept Sci. 2003 Jun;4(3):159-81. Review.

PMID:
12769716
[PubMed - indexed for MEDLINE]
13.

Computational approaches to protein-protein interaction.

Franzot G, Carugo O.

J Struct Funct Genomics. 2003;4(4):245-55.

PMID:
15185965
[PubMed - indexed for MEDLINE]
14.

Confirmation of human protein interaction data by human expression data.

Hahn A, Rahnenf├╝hrer J, Talwar P, Lengauer T.

BMC Bioinformatics. 2005 May 6;6:112.

PMID:
15877815
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Increasing confidence of protein interactomes using network topological metrics.

Chen J, Hsu W, Lee ML, Ng SK.

Bioinformatics. 2006 Aug 15;22(16):1998-2004. Epub 2006 Jun 20.

PMID:
16787971
[PubMed - indexed for MEDLINE]
Free Article
16.

A lock-and-key model for protein-protein interactions.

Morrison JL, Breitling R, Higham DJ, Gilbert DR.

Bioinformatics. 2006 Aug 15;22(16):2012-9. Epub 2006 Jun 20.

PMID:
16787977
[PubMed - indexed for MEDLINE]
Free Article
17.

Probabilistic prediction and ranking of human protein-protein interactions.

Scott MS, Barton GJ.

BMC Bioinformatics. 2007 Jul 5;8:239.

PMID:
17615067
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Pushing structural information into the yeast interactome by high-throughput protein docking experiments.

Mosca R, Pons C, Fernández-Recio J, Aloy P.

PLoS Comput Biol. 2009 Aug;5(8):e1000490. doi: 10.1371/journal.pcbi.1000490. Epub 2009 Aug 28.

PMID:
19714207
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Interactome: gateway into systems biology.

Cusick ME, Klitgord N, Vidal M, Hill DE.

Hum Mol Genet. 2005 Oct 15;14 Spec No. 2:R171-81. Epub 2005 Sep 14. Review.

PMID:
16162640
[PubMed - indexed for MEDLINE]
Free Article
20.

Influence of protein abundance on high-throughput protein-protein interaction detection.

Ivanic J, Yu X, Wallqvist A, Reifman J.

PLoS One. 2009 Jun 5;4(6):e5815. doi: 10.1371/journal.pone.0005815.

PMID:
19503833
[PubMed - indexed for MEDLINE]
Free PMC Article

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