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Results: 1 to 20 of 94

1.

qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data.

Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J.

Genome Biol. 2007;8(2):R19.

PMID:
17291332
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

A kinetic-based sigmoidal model for the polymerase chain reaction and its application to high-capacity absolute quantitative real-time PCR.

Rutledge RG, Stewart D.

BMC Biotechnol. 2008 May 8;8:47. doi: 10.1186/1472-6750-8-47.

PMID:
18466619
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

qpcR: an R package for sigmoidal model selection in quantitative real-time polymerase chain reaction analysis.

Ritz C, Spiess AN.

Bioinformatics. 2008 Jul 1;24(13):1549-51. doi: 10.1093/bioinformatics/btn227. Epub 2008 May 14.

PMID:
18482995
[PubMed - indexed for MEDLINE]
Free Article
4.

QPCR: Application for real-time PCR data management and analysis.

Pabinger S, Thallinger GG, Snajder R, Eichhorn H, Rader R, Trajanoski Z.

BMC Bioinformatics. 2009 Aug 27;10:268. doi: 10.1186/1471-2105-10-268.

PMID:
19712446
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

qPCR-DAMS: a database tool to analyze, manage, and store both relative and absolute quantitative real-time PCR data.

Jin N, He K, Liu L.

Physiol Genomics. 2006 May 16;25(3):525-7. Epub 2006 Feb 28.

PMID:
16507784
[PubMed - indexed for MEDLINE]
Free Article
6.

A standard curve based method for relative real time PCR data processing.

Larionov A, Krause A, Miller W.

BMC Bioinformatics. 2005 Mar 21;6:62.

PMID:
15780134
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Q-Gene: processing quantitative real-time RT-PCR data.

Simon P.

Bioinformatics. 2003 Jul 22;19(11):1439-40.

PMID:
12874059
[PubMed - indexed for MEDLINE]
Free Article
8.

DAG expression: high-throughput gene expression analysis of real-time PCR data using standard curves for relative quantification.

Ballester M, Cordón R, Folch JM.

PLoS One. 2013 Nov 18;8(11):e80385. doi: 10.1371/journal.pone.0080385. eCollection 2013.

PMID:
24260380
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

SASqPCR: robust and rapid analysis of RT-qPCR data in SAS.

Ling D.

PLoS One. 2012;7(1):e29788. doi: 10.1371/journal.pone.0029788. Epub 2012 Jan 6.

PMID:
22238653
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Processing of gene expression data generated by quantitative real-time RT-PCR.

Muller PY, Janovjak H, Miserez AR, Dobbie Z.

Biotechniques. 2002 Jun;32(6):1372-4, 1376, 1378-9. Erratum in: Biotechniques. 2002 Sep;33(3):514.

PMID:
12074169
[PubMed - indexed for MEDLINE]
11.

Complementary techniques: validation of gene expression data by quantitative real time PCR.

Provenzano M, Mocellin S.

Adv Exp Med Biol. 2007;593:66-73. Review.

PMID:
17265717
[PubMed - indexed for MEDLINE]
12.

MAKERGAUL: an innovative MAK2-based model and software for real-time PCR quantification.

Bultmann CA, Weiskirchen R.

Clin Biochem. 2014 Jan;47(1-2):117-22. doi: 10.1016/j.clinbiochem.2013.10.017. Epub 2013 Oct 30.

PMID:
24183882
[PubMed - indexed for MEDLINE]
Free Article
13.

SoFAR: software for fully automatic evaluation of real-time PCR data.

Wilhelm J, Pingoud A, Hahn M.

Biotechniques. 2003 Feb;34(2):324-32.

PMID:
12613255
[PubMed - indexed for MEDLINE]
14.

Reference gene selection for quantitative reverse transcription-polymerase chain reaction normalization during in vitro adventitious rooting in Eucalyptus globulus Labill.

de Almeida MR, Ruedell CM, Ricachenevsky FK, Sperotto RA, Pasquali G, Fett-Neto AG.

BMC Mol Biol. 2010 Sep 20;11:73. doi: 10.1186/1471-2199-11-73.

PMID:
20854682
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The real-time polymerase chain reaction.

Kubista M, Andrade JM, Bengtsson M, Forootan A, Jonák J, Lind K, Sindelka R, Sjöback R, Sjögreen B, Strömbom L, Ståhlberg A, Zoric N.

Mol Aspects Med. 2006 Apr-Jun;27(2-3):95-125. Epub 2006 Feb 3. Review.

PMID:
16460794
[PubMed - indexed for MEDLINE]
16.

HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R.

Dvinge H, Bertone P.

Bioinformatics. 2009 Dec 15;25(24):3325-6. doi: 10.1093/bioinformatics/btp578. Epub 2009 Oct 6.

PMID:
19808880
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Increased power of microarray analysis by use of an algorithm based on a multivariate procedure.

Krohn K, Eszlinger M, Paschke R, Roeder I, Schuster E.

Bioinformatics. 2005 Sep 1;21(17):3530-4. Epub 2005 Jul 5.

PMID:
15998661
[PubMed - indexed for MEDLINE]
Free Article
18.

The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.

Mansourian R, Mutch DM, Antille N, Aubert J, Fogel P, Le Goff JM, Moulin J, Petrov A, Rytz A, Voegel JJ, Roberts MA.

Bioinformatics. 2004 Nov 1;20(16):2726-37. Epub 2004 May 14.

PMID:
15145801
[PubMed - indexed for MEDLINE]
Free Article
19.

The degenerate primer design problem.

Linhart C, Shamir R.

Bioinformatics. 2002;18 Suppl 1:S172-81.

PMID:
12169545
[PubMed - indexed for MEDLINE]
Free Article
20.

Accurate Real-time Reverse Transcription Quantitative PCR.

Klatte M, Bauer P.

Methods Mol Biol. 2009;479:61-77. doi: 10.1007/978-1-59745-289-2_4.

PMID:
19083175
[PubMed - indexed for MEDLINE]

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