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Results: 1 to 20 of 310

1.

Identification of ciliary and ciliopathy genes in Caenorhabditis elegans through comparative genomics.

Chen N, Mah A, Blacque OE, Chu J, Phgora K, Bakhoum MW, Newbury CR, Khattra J, Chan S, Go A, Efimenko E, Johnsen R, Phirke P, Swoboda P, Marra M, Moerman DG, Leroux MR, Baillie DL, Stein LD.

Genome Biol. 2006;7(12):R126.

PMID:
17187676
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Functional genomics of the cilium, a sensory organelle.

Blacque OE, Perens EA, Boroevich KA, Inglis PN, Li C, Warner A, Khattra J, Holt RA, Ou G, Mah AK, McKay SJ, Huang P, Swoboda P, Jones SJ, Marra MA, Baillie DL, Moerman DG, Shaham S, Leroux MR.

Curr Biol. 2005 May 24;15(10):935-41.

PMID:
15916950
[PubMed - indexed for MEDLINE]
Free Article
3.

The in vivo dissection of direct RFX-target gene promoters in C. elegans reveals a novel cis-regulatory element, the C-box.

Burghoorn J, Piasecki BP, Crona F, Phirke P, Jeppsson KE, Swoboda P.

Dev Biol. 2012 Aug 15;368(2):415-26. doi: 10.1016/j.ydbio.2012.05.033. Epub 2012 Jun 5.

PMID:
22683808
[PubMed - indexed for MEDLINE]
Free Article
4.

Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.

Phirke P, Efimenko E, Mohan S, Burghoorn J, Crona F, Bakhoum MW, Trieb M, Schuske K, Jorgensen EM, Piasecki BP, Leroux MR, Swoboda P.

Dev Biol. 2011 Sep 1;357(1):235-47. doi: 10.1016/j.ydbio.2011.06.028. Epub 2011 Jun 27.

PMID:
21740898
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Identification of novel regulatory factor X (RFX) target genes by comparative genomics in Drosophila species.

Laurençon A, Dubruille R, Efimenko E, Grenier G, Bissett R, Cortier E, Rolland V, Swoboda P, Durand B.

Genome Biol. 2007;8(9):R195.

PMID:
17875208
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The dyf-3 gene encodes a novel protein required for sensory cilium formation in Caenorhabditis elegans.

Murayama T, Toh Y, Ohshima Y, Koga M.

J Mol Biol. 2005 Feb 25;346(3):677-87. Epub 2004 Dec 24.

PMID:
15713455
[PubMed - indexed for MEDLINE]
7.

Analysis of xbx genes in C. elegans.

Efimenko E, Bubb K, Mak HY, Holzman T, Leroux MR, Ruvkun G, Thomas JH, Swoboda P.

Development. 2005 Apr;132(8):1923-34.

PMID:
15790967
[PubMed - indexed for MEDLINE]
Free Article
8.

Fine tuning of RFX/DAF-19-regulated target gene expression through binding to multiple sites in Caenorhabditis elegans.

Chu JS, Tarailo-Graovac M, Zhang D, Wang J, Uyar B, Tu D, Trinh J, Baillie DL, Chen N.

Nucleic Acids Res. 2012 Jan;40(1):53-64. doi: 10.1093/nar/gkr690. Epub 2011 Sep 8.

PMID:
21908398
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The molecular identities of the Caenorhabditis elegans intraflagellar transport genes dyf-6, daf-10 and osm-1.

Bell LR, Stone S, Yochem J, Shaw JE, Herman RK.

Genetics. 2006 Jul;173(3):1275-86. Epub 2006 Apr 30.

PMID:
16648645
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae.

Rambaldi D, Guffanti A, Morandi P, Cassata G.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S22.

PMID:
16351749
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Identification and analysis of internal promoters in Caenorhabditis elegans operons.

Huang P, Pleasance ED, Maydan JS, Hunt-Newbury R, O'Neil NJ, Mah A, Baillie DL, Marra MA, Moerman DG, Jones SJ.

Genome Res. 2007 Oct;17(10):1478-85. Epub 2007 Aug 21.

PMID:
17712020
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans.

Swoboda P, Adler HT, Thomas JH.

Mol Cell. 2000 Mar;5(3):411-21.

PMID:
10882127
[PubMed - indexed for MEDLINE]
Free Article
13.

Dissection of the promoter region of the inositol 1,4,5-trisphosphate receptor gene, itr-1, in C. elegans: a molecular basis for cell-specific expression of IP3R isoforms.

Gower NJ, Temple GR, Schein JE, Marra M, Walker DS, Baylis HA.

J Mol Biol. 2001 Feb 16;306(2):145-57.

PMID:
11237590
[PubMed - indexed for MEDLINE]
14.

Basal body dysfunction is a likely cause of pleiotropic Bardet-Biedl syndrome.

Ansley SJ, Badano JL, Blacque OE, Hill J, Hoskins BE, Leitch CC, Kim JC, Ross AJ, Eichers ER, Teslovich TM, Mah AK, Johnsen RC, Cavender JC, Lewis RA, Leroux MR, Beales PL, Katsanis N.

Nature. 2003 Oct 9;425(6958):628-33. Epub 2003 Sep 21.

PMID:
14520415
[PubMed - indexed for MEDLINE]
15.
16.

Identification of CHE-13, a novel intraflagellar transport protein required for cilia formation.

Haycraft CJ, Schafer JC, Zhang Q, Taulman PD, Yoder BK.

Exp Cell Res. 2003 Apr 1;284(2):251-63.

PMID:
12651157
[PubMed - indexed for MEDLINE]
17.

The C. elegans homolog of the murine cystic kidney disease gene Tg737 functions in a ciliogenic pathway and is disrupted in osm-5 mutant worms.

Haycraft CJ, Swoboda P, Taulman PD, Thomas JH, Yoder BK.

Development. 2001 May;128(9):1493-505.

PMID:
11290289
[PubMed - indexed for MEDLINE]
Free Article
18.

Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport.

Blacque OE, Reardon MJ, Li C, McCarthy J, Mahjoub MR, Ansley SJ, Badano JL, Mah AK, Beales PL, Davidson WS, Johnsen RC, Audeh M, Plasterk RH, Baillie DL, Katsanis N, Quarmby LM, Wicks SR, Leroux MR.

Genes Dev. 2004 Jul 1;18(13):1630-42.

PMID:
15231740
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Caenorhabditis elegans DYF-11, an orthologue of mammalian Traf3ip1/MIP-T3, is required for sensory cilia formation.

Kunitomo H, Iino Y.

Genes Cells. 2008 Jan;13(1):13-25. doi: 10.1111/j.1365-2443.2007.01147.x.

PMID:
18173744
[PubMed - indexed for MEDLINE]
20.

Functional genomic approaches using the nematode Caenorhabditis elegans as a model system.

Lee J, Nam S, Hwang SB, Hong M, Kwon JY, Joeng KS, Im SH, Shim J, Park MC.

J Biochem Mol Biol. 2004 Jan 31;37(1):107-13. Review.

PMID:
14761308
[PubMed - indexed for MEDLINE]
Free Article

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