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Results: 1 to 20 of 99

1.

Evidence for intelligent (algorithm) design.

Srinivasan BS, Do CB, Batzoglou S.

Genome Biol. 2006;7(7):322.

PMID:
16879725
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Papers from the 10th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2006), Venice, Italy, April 2006.

[No authors listed]

J Comput Biol. 2007 Jun;14(5):537-697. No abstract available.

PMID:
17683258
[PubMed - indexed for MEDLINE]
3.

Understanding biology through intelligent systems.

Jurisica I, Wigle DA.

Genome Biol. 2002 Oct 24;3(11):reports4036. Epub 2002 Oct 24.

PMID:
12429057
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Algorithms for multiple protein structure alignment and structure-derived multiple sequence alignment.

Shatsky M, Nussinov R, Wolfson HJ.

Methods Mol Biol. 2008;413:125-46.

PMID:
18075164
[PubMed - indexed for MEDLINE]
5.

Routes are trees: the parsing perspective on protein folding.

Hockenmaier J, Joshi AK, Dill KA.

Proteins. 2007 Jan 1;66(1):1-15.

PMID:
17063473
[PubMed - indexed for MEDLINE]
6.

Variations on RNA folding and alignment: lessons from Benasque.

Bompfünewerer AF, Backofen R, Bernhart SH, Hertel J, Hofacker IL, Stadler PF, Will S.

J Math Biol. 2008 Jan;56(1-2):129-44. Epub 2007 Jul 5.

PMID:
17611759
[PubMed - indexed for MEDLINE]
7.

Proceeding of the 12th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2008). Singapore. March 30-April 2, 2008.

[No authors listed]

J Comput Biol. 2009 Aug;16(8):969-1193. No abstract available.

PMID:
19882768
[PubMed - indexed for MEDLINE]
8.

An amino acid substitution matrix for protein conformation identification.

Liu X, Zheng WM.

J Bioinform Comput Biol. 2006 Jun;4(3):769-82.

PMID:
16960974
[PubMed - indexed for MEDLINE]
9.

Better genechip microarray layouts by combining probe placement and embedding.

de Carvalho SA Jr, Rahmann S.

J Bioinform Comput Biol. 2008 Jun;6(3):623-41.

PMID:
18574866
[PubMed - indexed for MEDLINE]
10.

The simulation of the three-dimensional lattice hydrophobic-polar protein folding.

Guo YZ, Feng EM.

J Chem Phys. 2006 Dec 21;125(23):234703.

PMID:
17190566
[PubMed - indexed for MEDLINE]
11.

An introduction to protein contact prediction.

Hamilton N, Huber T.

Methods Mol Biol. 2008;453:87-104. doi: 10.1007/978-1-60327-429-6_3.

PMID:
18712298
[PubMed - indexed for MEDLINE]
12.

Computational analysis of RNAs.

Eddy SR.

Cold Spring Harb Symp Quant Biol. 2006;71:117-28.

PMID:
17381287
[PubMed - indexed for MEDLINE]
13.

Protein folding in hydrophobic-polar lattice model: a flexible ant-colony optimization approach.

Hu XM, Zhang J, Xiao J, Li Y.

Protein Pept Lett. 2008;15(5):469-77.

PMID:
18537736
[PubMed - indexed for MEDLINE]
14.

An intelligent two-stage evolutionary algorithm for dynamic pathway identification from gene expression profiles.

Ho SY, Hsieh CH, Yu FC, Huang HL.

IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):648-60.

PMID:
17975275
[PubMed - indexed for MEDLINE]
15.

INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.

Busch A, Backofen R.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W310-3. Epub 2007 Apr 22.

PMID:
17452349
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Protein structure prediction.

Al-Lazikani B, Hill EE, Morea V.

Methods Mol Biol. 2008;453:33-85. doi: 10.1007/978-1-60327-429-6_2.

PMID:
18712297
[PubMed - indexed for MEDLINE]
17.

Evolved cellular automata for protein secondary structure prediction imitate the determinants for folding observed in nature.

Chopra P, Bender A.

In Silico Biol. 2007;7(1):87-93.

PMID:
17688429
[PubMed - indexed for MEDLINE]
18.

Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots.

Song Y, Liu C, Malmberg RL, He C, Cai L.

Int J Bioinform Res Appl. 2006;2(3):289-304.

PMID:
18048167
[PubMed - indexed for MEDLINE]
19.

Prediction of consensus RNA secondary structures including pseudoknots.

Witwer C, Hofacker IL, Stadler PF.

IEEE/ACM Trans Comput Biol Bioinform. 2004 Apr-Jun;1(2):66-77.

PMID:
17048382
[PubMed - indexed for MEDLINE]
20.

Correlation between nucleotide composition and folding energy of coding sequences with special attention to wobble bases.

Biro JC.

Theor Biol Med Model. 2008 Jul 29;5:14. doi: 10.1186/1742-4682-5-14.

PMID:
18664268
[PubMed - indexed for MEDLINE]
Free PMC Article

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