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Results: 1 to 20 of 123

1.

Mutation patterns of amino acid tandem repeats in the human proteome.

Mularoni L, Guigó R, Albà MM.

Genome Biol. 2006;7(4):R33. Epub 2006 Apr 26.

PMID:
16640792
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genomic and evolutionary insights into genes encoding proteins with single amino acid repeats.

Siwach P, Pophaly SD, Ganesh S.

Mol Biol Evol. 2006 Jul;23(7):1357-69. Epub 2006 Apr 17.

PMID:
16618963
[PubMed - indexed for MEDLINE]
Free Article
3.

Amino acid reiterations in yeast are overrepresented in particular classes of proteins and show evidence of a slippage-like mutational process.

Mar Albà M, Santibáñez-Koref MF, Hancock JM.

J Mol Evol. 1999 Dec;49(6):789-97.

PMID:
10594180
[PubMed - indexed for MEDLINE]
4.

Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes.

Huang H, Winter EE, Wang H, Weinstock KG, Xing H, Goodstadt L, Stenson PD, Cooper DN, Smith D, Albà MM, Ponting CP, Fechtel K.

Genome Biol. 2004;5(7):R47. Epub 2004 Jun 28.

PMID:
15239832
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Highly constrained proteins contain an unexpectedly large number of amino acid tandem repeats.

Mularoni L, Veitia RA, Albà MM.

Genomics. 2007 Mar;89(3):316-25. Epub 2006 Dec 28.

PMID:
17196365
[PubMed - indexed for MEDLINE]
Free Article
6.

COPASAAR--a database for proteomic analysis of single amino acid repeats.

Depledge DP, Dalby AR.

BMC Bioinformatics. 2005 Aug 3;6:196.

PMID:
16078990
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

ProtRepeatsDB: a database of amino acid repeats in genomes.

Kalita MK, Ramasamy G, Duraisamy S, Chauhan VS, Gupta D.

BMC Bioinformatics. 2006 Jul 7;7:336.

PMID:
16827924
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Repeat polymorphisms within gene regions: phenotypic and evolutionary implications.

Wren JD, Forgacs E, Fondon JW 3rd, Pertsemlidis A, Cheng SY, Gallardo T, Williams RS, Shohet RV, Minna JD, Garner HR.

Am J Hum Genet. 2000 Aug;67(2):345-56. Epub 2000 Jul 7.

PMID:
10889045
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

CAG-encoded polyglutamine length polymorphism in the human genome.

Butland SL, Devon RS, Huang Y, Mead CL, Meynert AM, Neal SJ, Lee SS, Wilkinson A, Yang GS, Yuen MM, Hayden MR, Holt RA, Leavitt BR, Ouellette BF.

BMC Genomics. 2007 May 22;8:126.

PMID:
17519034
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Detection of single and multiple polymorphic loci by synthetic tandem repeats of short oligonucleotides.

Vergnaud G, Mariat D, Zoroastro M, Lauthier V.

Electrophoresis. 1991 Feb-Mar;12(2-3):134-40.

PMID:
2040260
[PubMed - indexed for MEDLINE]
11.

A role for selection in regulating the evolutionary emergence of disease-causing and other coding CAG repeats in humans and mice.

Hancock JM, Worthey EA, Santibáñez-Koref MF.

Mol Biol Evol. 2001 Jun;18(6):1014-23.

PMID:
11371590
[PubMed - indexed for MEDLINE]
Free Article
12.

Identification and topology of variant sequences within individual repeat domains of the human epithelial tumor mucin MUC1.

Engelmann K, Baldus SE, Hanisch FG.

J Biol Chem. 2001 Jul 27;276(30):27764-9. Epub 2001 May 11.

PMID:
11350974
[PubMed - indexed for MEDLINE]
Free Article
13.

Elevated evolutionary rate in genes with homopolymeric amino acid repeats constituting nondisordered structure.

Gojobori J, Ueda S.

Mol Biol Evol. 2011 Jan;28(1):543-50. doi: 10.1093/molbev/msq225. Epub 2010 Aug 26.

PMID:
20798138
[PubMed - indexed for MEDLINE]
Free Article
14.

Length polymorphism and head shape association among genes with polyglutamine repeats in the stalk-eyed fly, Teleopsis dalmanni.

Birge LM, Pitts ML, Baker R, Wilkinson GS.

BMC Evol Biol. 2010 Jul 27;10:227. doi: 10.1186/1471-2148-10-227.

PMID:
20663190
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Exact tandem repeats analyzer (E-TRA): a new program for DNA sequence mining.

Karaca M, Bilgen M, Onus AN, Ince AG, Elmasulu SY.

J Genet. 2005 Apr;84(1):49-54.

PMID:
15876583
[PubMed - indexed for MEDLINE]
Free Article
16.

Comparative analysis of amino acid repeats in rodents and humans.

Albà MM, Guigó R.

Genome Res. 2004 Apr;14(4):549-54.

PMID:
15059995
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Evolutionary clues from comparative analysis of Mycobacterium tuberculosis variable-number tandem repeat sequences within genetic families.

Thorne N, Underwood A, Gharbia S, Arnold C.

Infect Genet Evol. 2007 Mar;7(2):239-46. Epub 2006 Nov 13.

PMID:
17095303
[PubMed - indexed for MEDLINE]
18.

Molecular characterization and analysis of a gene encoding the acidic repeat protein (Arp) of Treponema pallidum.

Liu H, Rodes B, George R, Steiner B.

J Med Microbiol. 2007 Jun;56(Pt 6):715-21.

PMID:
17510254
[PubMed - indexed for MEDLINE]
Free Article
19.

Are only repeated triplets guilty?

De Fonzo V, Bersani E, Aluffi-Pentini F, Castrignanò T, Parisi V.

J Theor Biol. 1998 Sep 7;194(1):125-42.

PMID:
9778429
[PubMed - indexed for MEDLINE]
20.

Spatial positions of homopolymeric repeats in the human proteome and their effect on cellular toxicity.

Siwach P, Sengupta S, Parihar R, Ganesh S.

Biochem Biophys Res Commun. 2009 Mar 6;380(2):382-6. doi: 10.1016/j.bbrc.2009.01.101. Epub 2009 Jan 23.

PMID:
19250635
[PubMed - indexed for MEDLINE]

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