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Results: 1 to 20 of 169

1.

Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation.

Jen CH, Michalopoulos I, Westhead DR, Meyer P.

Genome Biol. 2005;6(6):R51. Epub 2005 Jun 1.

PMID:
15960803
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Sense and antisense transcripts of convergent gene pairs in Arabidopsis thaliana can share a common polyadenylation region.

Zubko E, Kunova A, Meyer P.

PLoS One. 2011 Feb 2;6(2):e16769. doi: 10.1371/journal.pone.0016769.

PMID:
21311762
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.

Jin H, Vacic V, Girke T, Lonardi S, Zhu JK.

BMC Mol Biol. 2008 Jan 14;9:6. doi: 10.1186/1471-2199-9-6.

PMID:
18194570
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.

Richardson CR, Luo QJ, Gontcharova V, Jiang YW, Samanta M, Youn E, Rock CD.

PLoS One. 2010 May 26;5(5):e10710. doi: 10.1371/journal.pone.0010710.

PMID:
20520764
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Protein-coding cis-natural antisense transcripts have high and broad expression in Arabidopsis.

Zhan S, Lukens L.

Plant Physiol. 2013 Apr;161(4):2171-80. doi: 10.1104/pp.112.212100. Epub 2013 Mar 1.

PMID:
23457227
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana.

Wang XJ, Gaasterland T, Chua NH.

Genome Biol. 2005;6(4):R30. Epub 2005 Mar 15.

PMID:
15833117
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Features of Arabidopsis genes and genome discovered using full-length cDNAs.

Alexandrov NN, Troukhan ME, Brover VV, Tatarinova T, Flavell RB, Feldmann KA.

Plant Mol Biol. 2006 Jan;60(1):69-85.

PMID:
16463100
[PubMed - indexed for MEDLINE]
8.

Integrated detection of natural antisense transcripts using strand-specific RNA sequencing data.

Li S, Liberman LM, Mukherjee N, Benfey PN, Ohler U.

Genome Res. 2013 Oct;23(10):1730-9. doi: 10.1101/gr.149310.112. Epub 2013 Jul 1.

PMID:
23816784
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Prediction of trans-antisense transcripts in Arabidopsis thaliana.

Wang H, Chua NH, Wang XJ.

Genome Biol. 2006;7(10):R92. Epub 2006 Oct 13.

PMID:
17040561
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

Wu X, Liu M, Downie B, Liang C, Ji G, Li QQ, Hunt AG.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12533-8. doi: 10.1073/pnas.1019732108. Epub 2011 Jul 11.

PMID:
21746925
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genome-wide mapping of alternative splicing in Arabidopsis thaliana.

Filichkin SA, Priest HD, Givan SA, Shen R, Bryant DW, Fox SE, Wong WK, Mockler TC.

Genome Res. 2010 Jan;20(1):45-58. doi: 10.1101/gr.093302.109. Epub 2009 Oct 26.

PMID:
19858364
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Comparative analysis of cis-encoded antisense RNAs in eukaryotes.

Numata K, Okada Y, Saito R, Kiyosawa H, Kanai A, Tomita M.

Gene. 2007 May 1;392(1-2):134-41. Epub 2006 Dec 13.

PMID:
17250976
[PubMed - indexed for MEDLINE]
13.

Systematic analysis of alternative first exons in plant genomes.

Chen WH, Lv G, Lv C, Zeng C, Hu S.

BMC Plant Biol. 2007 Oct 17;7:55.

PMID:
17941993
[PubMed - indexed for MEDLINE]
Free PMC Article
14.
15.

Gene regulation by sense-antisense overlap of polyadenylation signals.

Gu R, Zhang Z, DeCerbo JN, Carmichael GG.

RNA. 2009 Jun;15(6):1154-63. doi: 10.1261/rna.1608909. Epub 2009 Apr 23.

PMID:
19390116
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Distinct expression patterns of natural antisense transcripts in Arabidopsis.

Henz SR, Cumbie JS, Kasschau KD, Lohmann JU, Carrington JC, Weigel D, Schmid M.

Plant Physiol. 2007 Jul;144(3):1247-55. Epub 2007 May 11.

PMID:
17496106
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Antisense transcripts with rice full-length cDNAs.

Osato N, Yamada H, Satoh K, Ooka H, Yamamoto M, Suzuki K, Kawai J, Carninci P, Ohtomo Y, Murakami K, Matsubara K, Kikuchi S, Hayashizaki Y.

Genome Biol. 2003;5(1):R5. Epub 2003 Dec 11.

PMID:
14709177
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

An exonic splicing enhancer within a bidirectional coding sequence regulates alternative splicing of an antisense mRNA.

Salato VK, Rediske NW, Zhang C, Hastings ML, Munroe SH.

RNA Biol. 2010 Mar-Apr;7(2):179-90. Epub 2010 Mar 8.

PMID:
20200494
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Cloning and sequence analysis of a low temperature-induced gene from trifoliate orange with unusual pre-mRNA processing.

Jia Y, del Rio HS, Robbins AL, Louzada ES.

Plant Cell Rep. 2004 Sep;23(3):159-66. Epub 2004 May 12.

PMID:
15138696
[PubMed - indexed for MEDLINE]
20.

Genome-wide antisense transcription drives mRNA processing in bacteria.

Lasa I, Toledo-Arana A, Dobin A, Villanueva M, de los Mozos IR, Vergara-Irigaray M, Segura V, Fagegaltier D, Penad├ęs JR, Valle J, Solano C, Gingeras TR.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20172-7. doi: 10.1073/pnas.1113521108. Epub 2011 Nov 28.

PMID:
22123973
[PubMed - indexed for MEDLINE]
Free PMC Article

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