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Results: 1 to 20 of 84

1.

The origin of recent introns: transposons?

Roy SW.

Genome Biol. 2004;5(12):251. Epub 2004 Nov 29. Review.

PMID:
15575977
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The evolution of spliceosomal introns: patterns, puzzles and progress.

Roy SW, Gilbert W.

Nat Rev Genet. 2006 Mar;7(3):211-21. Review.

PMID:
16485020
[PubMed - indexed for MEDLINE]
3.

Origin of introns by 'intronization' of exonic sequences.

Irimia M, Rukov JL, Penny D, Vinther J, Garcia-Fernandez J, Roy SW.

Trends Genet. 2008 Aug;24(8):378-81. doi: 10.1016/j.tig.2008.05.007. Epub 2008 Jul 1.

PMID:
18597887
[PubMed - indexed for MEDLINE]
4.

Smoke without fire: most reported cases of intron gain in nematodes instead reflect intron losses.

Roy SW, Penny D.

Mol Biol Evol. 2006 Dec;23(12):2259-62. Epub 2006 Aug 30.

PMID:
16943250
[PubMed - indexed for MEDLINE]
Free Article
5.

Tempo and mode of spliceosomal intron evolution in actin of foraminifera.

Flakowski J, Bolivar I, Fahrni J, Pawlowski J.

J Mol Evol. 2006 Jul;63(1):30-41. Epub 2006 Jun 3.

PMID:
16755352
[PubMed - indexed for MEDLINE]
6.

Models of spliceosomal intron proliferation in the face of widespread ectopic expression.

Rodríguez-Trelles F, Tarrío R, Ayala FJ.

Gene. 2006 Feb 1;366(2):201-8. Epub 2005 Nov 8. Review.

PMID:
16288838
[PubMed - indexed for MEDLINE]
7.

Identifying the mechanisms of intron gain: progress and trends.

Yenerall P, Zhou L.

Biol Direct. 2012 Sep 10;7:29. doi: 10.1186/1745-6150-7-29. Review.

PMID:
22963364
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification.

Hoogewijs D, De Henau S, Dewilde S, Moens L, Couvreur M, Borgonie G, Vinogradov SN, Roy SW, Vanfleteren JR.

BMC Evol Biol. 2008 Oct 9;8:279. doi: 10.1186/1471-2148-8-279.

PMID:
18844991
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The evolution of spliceosomal introns in alveolates.

Nguyen HD, Yoshihama M, Kenmochi N.

Mol Biol Evol. 2007 May;24(5):1093-6. Epub 2007 Mar 1.

PMID:
17331959
[PubMed - indexed for MEDLINE]
Free Article
10.

Phase distribution of spliceosomal introns: implications for intron origin.

Nguyen HD, Yoshihama M, Kenmochi N.

BMC Evol Biol. 2006 Sep 8;6:69.

PMID:
16959043
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

New maximum likelihood estimators for eukaryotic intron evolution.

Nguyen HD, Yoshihama M, Kenmochi N.

PLoS Comput Biol. 2005 Dec;1(7):e79. Epub 2005 Dec 30. Erratum in: PLoS Comput Biol. 2006 Mar;2(3):e28.

PMID:
16389300
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Analysis of evolution of exon-intron structure of eukaryotic genes.

Rogozin IB, Sverdlov AV, Babenko VN, Koonin EV.

Brief Bioinform. 2005 Jun;6(2):118-34. Review.

PMID:
15975222
[PubMed - indexed for MEDLINE]
Free Article
13.

High rate of recent intron gain and loss in simultaneously duplicated Arabidopsis genes.

Knowles DG, McLysaght A.

Mol Biol Evol. 2006 Aug;23(8):1548-57. Epub 2006 May 23.

PMID:
16720694
[PubMed - indexed for MEDLINE]
Free Article
14.

Modern origin of numerous alternatively spliced human introns from tandem arrays.

Zhuo D, Madden R, Elela SA, Chabot B.

Proc Natl Acad Sci U S A. 2007 Jan 16;104(3):882-6. Epub 2007 Jan 8.

PMID:
17210920
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Intron loss and gain in Drosophila.

Coulombe-Huntington J, Majewski J.

Mol Biol Evol. 2007 Dec;24(12):2842-50. Epub 2007 Oct 27.

PMID:
17965454
[PubMed - indexed for MEDLINE]
Free Article
17.

Intron gain and loss in segmentally duplicated genes in rice.

Lin H, Zhu W, Silva JC, Gu X, Buell CR.

Genome Biol. 2006;7(5):R41. Epub 2006 May 23.

PMID:
16719932
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Evolutionary dynamics of introns in plastid-derived genes in plants: saturation nearly reached but slow intron gain continues.

Basu MK, Rogozin IB, Deusch O, Dagan T, Martin W, Koonin EV.

Mol Biol Evol. 2008 Jan;25(1):111-9. Epub 2007 Oct 31.

PMID:
17974547
[PubMed - indexed for MEDLINE]
Free Article
19.

Comparative genomic analysis of fungal genomes reveals intron-rich ancestors.

Stajich JE, Dietrich FS, Roy SW.

Genome Biol. 2007;8(10):R223.

PMID:
17949488
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Conservation versus parallel gains in intron evolution.

Sverdlov AV, Rogozin IB, Babenko VN, Koonin EV.

Nucleic Acids Res. 2005 Mar 23;33(6):1741-8. Print 2005. Erratum in: Nucleic Acids Res. 2005;33(17):5713.

PMID:
15788746
[PubMed - indexed for MEDLINE]
Free PMC Article

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