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Results: 1 to 20 of 128

1.

A genome annotation-driven approach to cloning the human ORFeome.

Collins JE, Wright CL, Edwards CA, Davis MP, Grinham JA, Cole CG, Goward ME, Aguado B, Mallya M, Mokrab Y, Huckle EJ, Beare DM, Dunham I.

Genome Biol. 2004;5(10):R84. Epub 2004 Sep 30.

PMID:
15461802
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The full-ORF clone resource of the German cDNA Consortium.

Bechtel S, Rosenfelder H, Duda A, Schmidt CP, Ernst U, Wellenreuther R, Mehrle A, Schuster C, Bahr A, Blöcker H, Heubner D, Hoerlein A, Michel G, Wedler H, Köhrer K, Ottenwälder B, Poustka A, Wiemann S, Schupp I.

BMC Genomics. 2007 Oct 31;8:399.

PMID:
17974005
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Systematic recovery and analysis of full-ORF human cDNA clones.

Baross A, Butterfield YS, Coughlin SM, Zeng T, Griffith M, Griffith OL, Petrescu AS, Smailus DE, Khattra J, McDonald HL, McKay SJ, Moksa M, Holt RA, Marra MA.

Genome Res. 2004 Oct;14(10B):2083-92.

PMID:
15489330
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

C. elegans ORFeome version 3.1: increasing the coverage of ORFeome resources with improved gene predictions.

Lamesch P, Milstein S, Hao T, Rosenberg J, Li N, Sequerra R, Bosak S, Doucette-Stamm L, Vandenhaute J, Hill DE, Vidal M.

Genome Res. 2004 Oct;14(10B):2064-9.

PMID:
15489327
[PubMed - indexed for MEDLINE]
Free PMC Article
5.
6.

From genome to proteome: developing expression clone resources for the human genome.

Temple G, Lamesch P, Milstein S, Hill DE, Wagner L, Moore T, Vidal M.

Hum Mol Genet. 2006 Apr 15;15 Spec No 1:R31-43. Review. Erratum in: Hum Mol Genet. 2006 Jul 1;15(13):2184.

PMID:
16651367
[PubMed - indexed for MEDLINE]
Free Article
7.

ORFDB: an information resource linking scientific content to a high-quality Open Reading Frame (ORF) collection.

Liang F, Matrubutham U, Parvizi B, Yen J, Duan D, Mirchandani J, Hashima S, Nguyen U, Ubil E, Loewenheim J, Yu X, Sipes S, Williams W, Wang L, Bennett R, Carrino J.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D595-9.

PMID:
14681490
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions.

Wei C, Lamesch P, Arumugam M, Rosenberg J, Hu P, Vidal M, Brent MR.

Genome Res. 2005 Apr;15(4):577-82.

PMID:
15805498
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes.

Lamesch P, Li N, Milstein S, Fan C, Hao T, Szabo G, Hu Z, Venkatesan K, Bethel G, Martin P, Rogers J, Lawlor S, McLaren S, Dricot A, Borick H, Cusick ME, Vandenhaute J, Dunham I, Hill DE, Vidal M.

Genomics. 2007 Mar;89(3):307-15. Epub 2007 Jan 5.

PMID:
17207965
[PubMed - indexed for MEDLINE]
Free Article
10.

C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression.

Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, Moore T, Hudson JR Jr, Hartley JL, Brasch MA, Vandenhaute J, Boulton S, Endress GA, Jenna S, Chevet E, Papasotiropoulos V, Tolias PP, Ptacek J, Snyder M, Huang R, Chance MR, Lee H, Doucette-Stamm L, Hill DE, Vidal M.

Nat Genet. 2003 May;34(1):35-41.

PMID:
12679813
[PubMed - indexed for MEDLINE]
11.

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.

PMID:
16305752
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Development of a functional genomics platform for Sinorhizobium meliloti: construction of an ORFeome.

Schroeder BK, House BL, Mortimer MW, Yurgel SN, Maloney SC, Ward KL, Kahn ML.

Appl Environ Microbiol. 2005 Oct;71(10):5858-64.

PMID:
16204497
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Integrative annotation of 21,037 human genes validated by full-length cDNA clones.

Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, Nishikawa T, Hirakawa M, Thierry-Mieg J, Thierry-Mieg D, Ashurst J, Jia L, Nakao M, Thomas MA, Mulder N, Karavidopoulou Y, Jin L, Kim S, Yasuda T, Lenhard B, Eveno E, Suzuki Y, Yamasaki C, Takeda J, Gough C, Hilton P, Fujii Y, Sakai H, Tanaka S, Amid C, Bellgard M, Bonaldo Mde F, Bono H, Bromberg SK, Brookes AJ, Bruford E, Carninci P, Chelala C, Couillault C, de Souza SJ, Debily MA, Devignes MD, Dubchak I, Endo T, Estreicher A, Eyras E, Fukami-Kobayashi K, Gopinath GR, Graudens E, Hahn Y, Han M, Han ZG, Hanada K, Hanaoka H, Harada E, Hashimoto K, Hinz U, Hirai M, Hishiki T, Hopkinson I, Imbeaud S, Inoko H, Kanapin A, Kaneko Y, Kasukawa T, Kelso J, Kersey P, Kikuno R, Kimura K, Korn B, Kuryshev V, Makalowska I, Makino T, Mano S, Mariage-Samson R, Mashima J, Matsuda H, Mewes HW, Minoshima S, Nagai K, Nagasaki H, Nagata N, Nigam R, Ogasawara O, Ohara O, Ohtsubo M, Okada N, Okido T, Oota S, Ota M, Ota T, Otsuki T, Piatier-Tonneau D, Poustka A, Ren SX, Saitou N, Sakai K, Sakamoto S, Sakate R, Schupp I, Servant F, Sherry S, Shiba R, Shimizu N, Shimoyama M, Simpson AJ, Soares B, Steward C, Suwa M, Suzuki M, Takahashi A, Tamiya G, Tanaka H, Taylor T, Terwilliger JD, Unneberg P, Veeramachaneni V, Watanabe S, Wilming L, Yasuda N, Yoo HS, Stodolsky M, Makalowski W, Go M, Nakai K, Takagi T, Kanehisa M, Sakaki Y, Quackenbush J, Okazaki Y, Hayashizaki Y, Hide W, Chakraborty R, Nishikawa K, Sugawara H, Tateno Y, Chen Z, Oishi M, Tonellato P, Apweiler R, Okubo K, Wagner L, Wiemann S, Strausberg RL, Isogai T, Auffray C, Nomura N, Gojobori T, Sugano S.

PLoS Biol. 2004 Jun;2(6):e162. Epub 2004 Apr 20. Erratum in: PLoS Biol. 2004 Jul;2(7):e256.

PMID:
15103394
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Empirical analysis of transcriptional activity in the Arabidopsis genome.

Yamada K, Lim J, Dale JM, Chen H, Shinn P, Palm CJ, Southwick AM, Wu HC, Kim C, Nguyen M, Pham P, Cheuk R, Karlin-Newmann G, Liu SX, Lam B, Sakano H, Wu T, Yu G, Miranda M, Quach HL, Tripp M, Chang CH, Lee JM, Toriumi M, Chan MM, Tang CC, Onodera CS, Deng JM, Akiyama K, Ansari Y, Arakawa T, Banh J, Banno F, Bowser L, Brooks S, Carninci P, Chao Q, Choy N, Enju A, Goldsmith AD, Gurjal M, Hansen NF, Hayashizaki Y, Johnson-Hopson C, Hsuan VW, Iida K, Karnes M, Khan S, Koesema E, Ishida J, Jiang PX, Jones T, Kawai J, Kamiya A, Meyers C, Nakajima M, Narusaka M, Seki M, Sakurai T, Satou M, Tamse R, Vaysberg M, Wallender EK, Wong C, Yamamura Y, Yuan S, Shinozaki K, Davis RW, Theologis A, Ecker JR.

Science. 2003 Oct 31;302(5646):842-6.

PMID:
14593172
[PubMed - indexed for MEDLINE]
Free Article
15.

Construction of a highly flexible and comprehensive gene collection representing the ORFeome of the human pathogen Chlamydia pneumoniae.

Maier CJ, Maier RH, Virok DP, Maass M, Hintner H, Bauer JW, Onder K.

BMC Genomics. 2012 Nov 16;13:632. doi: 10.1186/1471-2164-13-632.

PMID:
23157390
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Human ORFeome version 1.1: a platform for reverse proteomics.

Rual JF, Hirozane-Kishikawa T, Hao T, Bertin N, Li S, Dricot A, Li N, Rosenberg J, Lamesch P, Vidalain PO, Clingingsmith TR, Hartley JL, Esposito D, Cheo D, Moore T, Simmons B, Sequerra R, Bosak S, Doucette-Stamm L, Le Peuch C, Vandenhaute J, Cusick ME, Albala JS, Hill DE, Vidal M.

Genome Res. 2004 Oct;14(10B):2128-35.

PMID:
15489335
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Systematic cloning of an ORFeome using the Gateway system.

Matsuyama A, Yoshida M.

Methods Mol Biol. 2009;577:11-24. doi: 10.1007/978-1-60761-232-2_2.

PMID:
19718505
[PubMed - indexed for MEDLINE]
18.

An integrated PCR colony hybridization approach to screen cDNA libraries for full-length coding sequences.

Pollier J, González-Guzmán M, Ardiles-Diaz W, Geelen D, Goossens A.

PLoS One. 2011;6(9):e24978. doi: 10.1371/journal.pone.0024978. Epub 2011 Sep 15.

PMID:
21949817
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J; MGC Project Team.

Genome Res. 2004 Oct;14(10B):2121-7. Erratum in: Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to Morin, Ryan].

PMID:
15489334
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes.

Gong W, Shen YP, Ma LG, Pan Y, Du YL, Wang DH, Yang JY, Hu LD, Liu XF, Dong CX, Ma L, Chen YH, Yang XY, Gao Y, Zhu D, Tan X, Mu JY, Zhang DB, Liu YL, Dinesh-Kumar SP, Li Y, Wang XP, Gu HY, Qu LJ, Bai SN, Lu YT, Li JY, Zhao JD, Zuo J, Huang H, Deng XW, Zhu YX.

Plant Physiol. 2004 Jun;135(2):773-82.

PMID:
15208423
[PubMed - indexed for MEDLINE]
Free PMC Article

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