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Results: 1 to 20 of 191

1.

Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing.

Castle J, Garrett-Engele P, Armour CD, Duenwald SJ, Loerch PM, Meyer MR, Schadt EE, Stoughton R, Parrish ML, Shoemaker DD, Johnson JM.

Genome Biol. 2003;4(10):R66. Epub 2003 Sep 19.

PMID:
14519201
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Gene expression and isoform variation analysis using Affymetrix Exon Arrays.

Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.

BMC Genomics. 2008 Nov 7;9:529. doi: 10.1186/1471-2164-9-529. Erratum in: BMC Genomics. 2009 Mar 23;10. doi: 10.1186/1471-2164-10-121.

PMID:
18990248
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Detecting tissue-specific alternative splicing and disease-associated aberrant splicing of the PTCH gene with exon junction microarrays.

Nagao K, Togawa N, Fujii K, Uchikawa H, Kohno Y, Yamada M, Miyashita T.

Hum Mol Genet. 2005 Nov 15;14(22):3379-88. Epub 2005 Oct 3.

PMID:
16203740
[PubMed - indexed for MEDLINE]
Free Article
4.

Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

Ha KCh, Coulombe-Huntington J, Majewski J.

BMC Genomics. 2009 Nov 12;10:519. doi: 10.1186/1471-2164-10-519.

PMID:
19909511
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Categorization and characterization of transcript-confirmed constitutively and alternatively spliced introns and exons from human.

Clark F, Thanaraj TA.

Hum Mol Genet. 2002 Feb 15;11(4):451-64.

PMID:
11854178
[PubMed - indexed for MEDLINE]
Free Article
6.

Identification of low-abundance alternatively spliced mRNA variants by exon exclusive reverse transcriptase polymerase chain reaction.

Wang F, Zhao Y, Hao Y, Tan Z.

Anal Biochem. 2008 Dec 15;383(2):307-10. doi: 10.1016/j.ab.2008.09.002. Epub 2008 Sep 10.

PMID:
18817741
[PubMed - indexed for MEDLINE]
7.

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution.

Wilhelm BT, Marguerat S, Watt S, Schubert F, Wood V, Goodhead I, Penkett CJ, Rogers J, Bähler J.

Nature. 2008 Jun 26;453(7199):1239-43. doi: 10.1038/nature07002. Epub 2008 May 18.

PMID:
18488015
[PubMed - indexed for MEDLINE]
8.

A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.

Genome Inform. 2006;17(1):88-99.

PMID:
17503359
[PubMed - indexed for MEDLINE]
9.

Mutation screening at the RNA level of the STK11/LKB1 gene in Peutz-Jeghers syndrome reveals complex splicing abnormalities and a novel mRNA isoform (STK11 c.597(insertion mark)598insIVS4).

Abed AA, Günther K, Kraus C, Hohenberger W, Ballhausen WG.

Hum Mutat. 2001 Nov;18(5):397-410.

PMID:
11668633
[PubMed - indexed for MEDLINE]
10.

[Identification of nine novel alternative splicing isoforms of RHD mRNA].

Xu XG, Wu JJ, Hong XZ, Zhu FM, Yan LX.

Yi Chuan. 2006 Oct;28(10):1213-8. Chinese.

PMID:
17035176
[PubMed - indexed for MEDLINE]
11.

Five novel alternatively spliced transcripts of DNA (cytosine-5) methyltransferase 2 in human peripheral blood leukocytes.

Franchina M, Hooper J, Kay PH.

Int J Biochem Cell Biol. 2001 Nov;33(11):1104-15.

PMID:
11551826
[PubMed - indexed for MEDLINE]
12.

A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome.

Sultan M, Schulz MH, Richard H, Magen A, Klingenhoff A, Scherf M, Seifert M, Borodina T, Soldatov A, Parkhomchuk D, Schmidt D, O'Keeffe S, Haas S, Vingron M, Lehrach H, Yaspo ML.

Science. 2008 Aug 15;321(5891):956-60. doi: 10.1126/science.1160342. Epub 2008 Jul 3.

PMID:
18599741
[PubMed - indexed for MEDLINE]
Free Article
13.

Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns.

Ner-Gaon H, Fluhr R.

DNA Res. 2006 Jun 30;13(3):111-21. Epub 2006 Sep 16.

PMID:
16980712
[PubMed - indexed for MEDLINE]
Free Article
14.

The human XPC DNA repair gene: arrangement, splice site information content and influence of a single nucleotide polymorphism in a splice acceptor site on alternative splicing and function.

Khan SG, Muniz-Medina V, Shahlavi T, Baker CC, Inui H, Ueda T, Emmert S, Schneider TD, Kraemer KH.

Nucleic Acids Res. 2002 Aug 15;30(16):3624-31.

PMID:
12177305
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Model system for evaluation of alternative splicing: exon skipping.

Yuan ZA, Chen E, Gibson CW.

DNA Cell Biol. 2001 Dec;20(12):807-13.

PMID:
11879574
[PubMed - indexed for MEDLINE]
16.

Discovery of tissue-specific exons using comprehensive human exon microarrays.

Clark TA, Schweitzer AC, Chen TX, Staples MK, Lu G, Wang H, Williams A, Blume JE.

Genome Biol. 2007;8(4):R64.

PMID:
17456239
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Molecular structure and alternative splicing of the human carboxypeptidase M gene.

Pessoa LG, da Silva ID, Baptista HA, Pesquero JL, Paiva AC, Bader M, Pesquero JB.

Biol Chem. 2002 Feb;383(2):263-9.

PMID:
11934264
[PubMed - indexed for MEDLINE]
18.
19.

Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.

Kechris K, Yang YH, Yeh RF.

BMC Genomics. 2008 Nov 20;9:551. doi: 10.1186/1471-2164-9-551.

PMID:
19021909
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.

Johnson JM, Castle J, Garrett-Engele P, Kan Z, Loerch PM, Armour CD, Santos R, Schadt EE, Stoughton R, Shoemaker DD.

Science. 2003 Dec 19;302(5653):2141-4.

PMID:
14684825
[PubMed - indexed for MEDLINE]
Free Article

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