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Results: 1 to 20 of 213

1.

Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence.

Cheung J, Estivill X, Khaja R, MacDonald JR, Lau K, Tsui LC, Scherer SW.

Genome Biol. 2003;4(4):R25. Epub 2003 Mar 17.

PMID:
12702206
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Recent segmental and gene duplications in the mouse genome.

Cheung J, Wilson MD, Zhang J, Khaja R, MacDonald JR, Heng HH, Koop BF, Scherer SW.

Genome Biol. 2003;4(8):R47. Epub 2003 Jul 9.

PMID:
12914656
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Enrichment of segmental duplications in regions of breaks of synteny between the human and mouse genomes suggest their involvement in evolutionary rearrangements.

Armengol L, Pujana MA, Cheung J, Scherer SW, Estivill X.

Hum Mol Genet. 2003 Sep 1;12(17):2201-8. Epub 2003 Jul 8.

PMID:
12915466
[PubMed - indexed for MEDLINE]
Free Article
4.

Chromosomal regions containing high-density and ambiguously mapped putative single nucleotide polymorphisms (SNPs) correlate with segmental duplications in the human genome.

Estivill X, Cheung J, Pujana MA, Nakabayashi K, Scherer SW, Tsui LC.

Hum Mol Genet. 2002 Aug 15;11(17):1987-95.

PMID:
12165560
[PubMed - indexed for MEDLINE]
Free Article
5.

The sequence of the human genome.

Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, Smith HO, Yandell M, Evans CA, Holt RA, Gocayne JD, Amanatides P, Ballew RM, Huson DH, Wortman JR, Zhang Q, Kodira CD, Zheng XH, Chen L, Skupski M, Subramanian G, Thomas PD, Zhang J, Gabor Miklos GL, Nelson C, Broder S, Clark AG, Nadeau J, McKusick VA, Zinder N, Levine AJ, Roberts RJ, Simon M, Slayman C, Hunkapiller M, Bolanos R, Delcher A, Dew I, Fasulo D, Flanigan M, Florea L, Halpern A, Hannenhalli S, Kravitz S, Levy S, Mobarry C, Reinert K, Remington K, Abu-Threideh J, Beasley E, Biddick K, Bonazzi V, Brandon R, Cargill M, Chandramouliswaran I, Charlab R, Chaturvedi K, Deng Z, Di Francesco V, Dunn P, Eilbeck K, Evangelista C, Gabrielian AE, Gan W, Ge W, Gong F, Gu Z, Guan P, Heiman TJ, Higgins ME, Ji RR, Ke Z, Ketchum KA, Lai Z, Lei Y, Li Z, Li J, Liang Y, Lin X, Lu F, Merkulov GV, Milshina N, Moore HM, Naik AK, Narayan VA, Neelam B, Nusskern D, Rusch DB, Salzberg S, Shao W, Shue B, Sun J, Wang Z, Wang A, Wang X, Wang J, Wei M, Wides R, Xiao C, Yan C, Yao A, Ye J, Zhan M, Zhang W, Zhang H, Zhao Q, Zheng L, Zhong F, Zhong W, Zhu S, Zhao S, Gilbert D, Baumhueter S, Spier G, Carter C, Cravchik A, Woodage T, Ali F, An H, Awe A, Baldwin D, Baden H, Barnstead M, Barrow I, Beeson K, Busam D, Carver A, Center A, Cheng ML, Curry L, Danaher S, Davenport L, Desilets R, Dietz S, Dodson K, Doup L, Ferriera S, Garg N, Gluecksmann A, Hart B, Haynes J, Haynes C, Heiner C, Hladun S, Hostin D, Houck J, Howland T, Ibegwam C, Johnson J, Kalush F, Kline L, Koduru S, Love A, Mann F, May D, McCawley S, McIntosh T, McMullen I, Moy M, Moy L, Murphy B, Nelson K, Pfannkoch C, Pratts E, Puri V, Qureshi H, Reardon M, Rodriguez R, Rogers YH, Romblad D, Ruhfel B, Scott R, Sitter C, Smallwood M, Stewart E, Strong R, Suh E, Thomas R, Tint NN, Tse S, Vech C, Wang G, Wetter J, Williams S, Williams M, Windsor S, Winn-Deen E, Wolfe K, Zaveri J, Zaveri K, Abril JF, Guigó R, Campbell MJ, Sjolander KV, Karlak B, Kejariwal A, Mi H, Lazareva B, Hatton T, Narechania A, Diemer K, Muruganujan A, Guo N, Sato S, Bafna V, Istrail S, Lippert R, Schwartz R, Walenz B, Yooseph S, Allen D, Basu A, Baxendale J, Blick L, Caminha M, Carnes-Stine J, Caulk P, Chiang YH, Coyne M, Dahlke C, Mays A, Dombroski M, Donnelly M, Ely D, Esparham S, Fosler C, Gire H, Glanowski S, Glasser K, Glodek A, Gorokhov M, Graham K, Gropman B, Harris M, Heil J, Henderson S, Hoover J, Jennings D, Jordan C, Jordan J, Kasha J, Kagan L, Kraft C, Levitsky A, Lewis M, Liu X, Lopez J, Ma D, Majoros W, McDaniel J, Murphy S, Newman M, Nguyen T, Nguyen N, Nodell M, Pan S, Peck J, Peterson M, Rowe W, Sanders R, Scott J, Simpson M, Smith T, Sprague A, Stockwell T, Turner R, Venter E, Wang M, Wen M, Wu D, Wu M, Xia A, Zandieh A, Zhu X.

Science. 2001 Feb 16;291(5507):1304-51. Erratum in: Science 2001 Jun 5;292(5523):1838.

PMID:
11181995
[PubMed - indexed for MEDLINE]
6.

Large-scale inference of the point mutational spectrum in human segmental duplications.

Nakken S, Rødland EA, Rognes T, Hovig E.

BMC Genomics. 2009 Jan 22;10:43. doi: 10.1186/1471-2164-10-43.

PMID:
19161616
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence.

Taudien S, Galgoczy P, Huse K, Reichwald K, Schilhabel M, Szafranski K, Shimizu A, Asakawa S, Frankish A, Loncarevic IF, Shimizu N, Siddiqui R, Platzer M.

BMC Genomics. 2004 Dec 10;5(1):92.

PMID:
15588320
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Shotgun sequence assembly and recent segmental duplications within the human genome.

She X, Jiang Z, Clark RA, Liu G, Cheng Z, Tuzun E, Church DM, Sutton G, Halpern AL, Eichler EE.

Nature. 2004 Oct 21;431(7011):927-30.

PMID:
15496912
[PubMed - indexed for MEDLINE]
9.

Segmental duplication density decrease with distance to human-mouse breaks of synteny.

Sainz J, Rovensky P, Gudjonsson SA, Thorleifsson G, Stefansson K, Gulcher JR.

Eur J Hum Genet. 2006 Feb;14(2):216-21.

PMID:
16306878
[PubMed - indexed for MEDLINE]
Free Article
10.

Patterns of segmental duplication in the human genome.

Zhang L, Lu HH, Chung WY, Yang J, Li WH.

Mol Biol Evol. 2005 Jan;22(1):135-41. Epub 2004 Sep 15.

PMID:
15371527
[PubMed - indexed for MEDLINE]
Free Article
11.

A genome-wide comparison of recent chimpanzee and human segmental duplications.

Cheng Z, Ventura M, She X, Khaitovich P, Graves T, Osoegawa K, Church D, DeJong P, Wilson RK, Pääbo S, Rocchi M, Eichler EE.

Nature. 2005 Sep 1;437(7055):88-93.

PMID:
16136132
[PubMed - indexed for MEDLINE]
12.

Recent segmental duplications in the human genome.

Bailey JA, Gu Z, Clark RA, Reinert K, Samonte RV, Schwartz S, Adams MD, Myers EW, Li PW, Eichler EE.

Science. 2002 Aug 9;297(5583):1003-7.

PMID:
12169732
[PubMed - indexed for MEDLINE]
Free Article
13.

[Structural variation in the human genome contributes to variation of traits].

Barøy T, Misceo D, Frengen E.

Tidsskr Nor Laegeforen. 2008 Sep 11;128(17):1951-5. Review. Norwegian.

PMID:
18787571
[PubMed - indexed for MEDLINE]
Free Article
14.

Relationship between segmental duplications and repeat sequences in human chromosome 7.

Murakami H, Aburatani S, Horimoto K.

Genome Inform. 2005;16(1):13-21.

PMID:
16362902
[PubMed - indexed for MEDLINE]
15.

Analysis of recent segmental duplications in the bovine genome.

Liu GE, Ventura M, Cellamare A, Chen L, Cheng Z, Zhu B, Li C, Song J, Eichler EE.

BMC Genomics. 2009 Dec 1;10:571. doi: 10.1186/1471-2164-10-571.

PMID:
19951423
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Complex SNP-related sequence variation in segmental genome duplications.

Fredman D, White SJ, Potter S, Eichler EE, Den Dunnen JT, Brookes AJ.

Nat Genet. 2004 Aug;36(8):861-6. Epub 2004 Jul 11.

PMID:
15247918
[PubMed - indexed for MEDLINE]
17.
18.

A non-human primate BAC resource to study interchromosomal segmental duplications.

Kirsch S, Hodler C, Schempp W.

Cytogenet Genome Res. 2009;125(4):253-9. doi: 10.1159/000235930. Epub 2009 Oct 27.

PMID:
19864887
[PubMed - indexed for MEDLINE]
19.

Segmental duplications: organization and impact within the current human genome project assembly.

Bailey JA, Yavor AM, Massa HF, Trask BJ, Eichler EE.

Genome Res. 2001 Jun;11(6):1005-17.

PMID:
11381028
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia.

Christian SL, McDonough J, Liu Cy CY, Shaikh S, Vlamakis V, Badner JA, Chakravarti A, Gershon ES.

Genomics. 2002 May;79(5):635-56.

PMID:
11991713
[PubMed - indexed for MEDLINE]

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