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Results: 1 to 20 of 82

1.

Statistical tests for differential expression in cDNA microarray experiments.

Cui X, Churchill GA.

Genome Biol. 2003;4(4):210. Epub 2003 Mar 17. Review.

PMID:
12702200
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide arrays.

Barrera L, Benner C, Tao YC, Winzeler E, Zhou Y.

BMC Bioinformatics. 2004 Apr 20;5:42.

PMID:
15099405
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Using ANOVA to analyze microarray data.

Churchill GA.

Biotechniques. 2004 Aug;37(2):173-5, 177. Review.

PMID:
15335204
[PubMed - indexed for MEDLINE]
4.

Power estimation of the t test for detecting differential gene expression.

Begun A.

Funct Integr Genomics. 2008 May;8(2):109-13. Epub 2007 Nov 13.

PMID:
17999097
[PubMed - indexed for MEDLINE]
5.

Microarray data analysis: a hierarchical T-test to handle heteroscedasticity.

de Menezes RX, Boer JM, van Houwelingen HC.

Appl Bioinformatics. 2004;3(4):229-35.

PMID:
15702953
[PubMed - indexed for MEDLINE]
6.

Differential analysis of DNA microarray gene expression data.

Hatfield GW, Hung SP, Baldi P.

Mol Microbiol. 2003 Feb;47(4):871-7. Review.

PMID:
12581345
[PubMed - indexed for MEDLINE]
7.

Replication, variation and normalisation in microarray experiments.

Altman N.

Appl Bioinformatics. 2005;4(1):33-44.

PMID:
16000011
[PubMed - indexed for MEDLINE]
8.

Empirical comparison of tests for differential expression on simulated time series microarray experiments.

Fischer EA, Friedman M, Markey MK.

AMIA Annu Symp Proc. 2006:921.

PMID:
17238540
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Using ANOVA for gene selection from microarray studies of the nervous system.

Pavlidis P.

Methods. 2003 Dec;31(4):282-9.

PMID:
14597312
[PubMed - indexed for MEDLINE]
10.

Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data.

Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S.

BMC Bioinformatics. 2005 Feb 10;6:26.

PMID:
15705192
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Models for microarray gene expression data.

Lee ML, Lu W, Whitmore GA, Beier D.

J Biopharm Stat. 2002 Feb;12(1):1-19.

PMID:
12146717
[PubMed - indexed for MEDLINE]
12.

Identifying temporally differentially expressed genes through functional principal components analysis.

Liu X, Yang MC.

Biostatistics. 2009 Oct;10(4):667-79. doi: 10.1093/biostatistics/kxp022. Epub 2009 Jul 14.

PMID:
19602570
[PubMed - indexed for MEDLINE]
Free Article
13.

ARSyN: a method for the identification and removal of systematic noise in multifactorial time course microarray experiments.

Nueda MJ, Ferrer A, Conesa A.

Biostatistics. 2012 Jul;13(3):553-66. doi: 10.1093/biostatistics/kxr042. Epub 2011 Nov 14.

PMID:
22085896
[PubMed - indexed for MEDLINE]
Free Article
14.

A new non-linear normalization method for reducing variability in DNA microarray experiments.

Workman C, Jensen LJ, Jarmer H, Berka R, Gautier L, Nielser HB, Saxild HH, Nielsen C, Brunak S, Knudsen S.

Genome Biol. 2002 Aug 30;3(9):research0048. Epub 2002 Aug 30.

PMID:
12225587
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identifying differentially expressed genes in cDNA microarray experiments.

Baggerly KA, Coombes KR, Hess KR, Stivers DN, Abruzzo LV, Zhang W.

J Comput Biol. 2001;8(6):639-59.

PMID:
11747617
[PubMed - indexed for MEDLINE]
16.

Assessing gene significance from cDNA microarray expression data via mixed models.

Wolfinger RD, Gibson G, Wolfinger ED, Bennett L, Hamadeh H, Bushel P, Afshari C, Paules RS.

J Comput Biol. 2001;8(6):625-37.

PMID:
11747616
[PubMed - indexed for MEDLINE]
17.

The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.

Mansourian R, Mutch DM, Antille N, Aubert J, Fogel P, Le Goff JM, Moulin J, Petrov A, Rytz A, Voegel JJ, Roberts MA.

Bioinformatics. 2004 Nov 1;20(16):2726-37. Epub 2004 May 14.

PMID:
15145801
[PubMed - indexed for MEDLINE]
Free Article
18.

Evaluation of experimental designs for two-color cDNA microarrays.

Yang CW, Hsiao CF, Chou CK.

J Comput Biol. 2005 Nov;12(9):1202-20.

PMID:
16305329
[PubMed - indexed for MEDLINE]
19.

Evaluation of a statistical equivalence test applied to microarray data.

Qiu J, Cui X.

J Biopharm Stat. 2010 Mar;20(2):240-66. doi: 10.1080/10543400903572738.

PMID:
20309757
[PubMed - indexed for MEDLINE]
20.

Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA.

Nueda MJ, Conesa A, Westerhuis JA, Hoefsloot HC, Smilde AK, Talón M, Ferrer A.

Bioinformatics. 2007 Jul 15;23(14):1792-800. Epub 2007 May 22.

PMID:
17519250
[PubMed - indexed for MEDLINE]
Free Article

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