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Results: 1 to 20 of 100

1.

Seeing chordate evolution through the Ciona genome sequence.

CaƱestro C, Bassham S, Postlethwait JH.

Genome Biol. 2003;4(3):208. Epub 2003 Mar 3. Review.

PMID:
12620098
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Regulatory genes in the ancestral chordate genomes.

Satou Y, Wada S, Sasakura Y, Satoh N.

Dev Genes Evol. 2008 Dec;218(11-12):715-21. doi: 10.1007/s00427-008-0219-y. Epub 2008 Sep 5.

PMID:
18773221
[PubMed - indexed for MEDLINE]
3.

The repertoire of G protein-coupled receptors in the sea squirt Ciona intestinalis.

Kamesh N, Aradhyam GK, Manoj N.

BMC Evol Biol. 2008 May 1;8:129. doi: 10.1186/1471-2148-8-129.

PMID:
18452600
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. V. Genes for receptor tyrosine kinase pathway and Notch signaling pathway.

Satou Y, Sasakura Y, Yamada L, Imai KS, Satoh N, Degnan B.

Dev Genes Evol. 2003 Jun;213(5-6):254-63. Epub 2003 May 9.

PMID:
12739141
[PubMed - indexed for MEDLINE]
5.

The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.

Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS.

Science. 2002 Dec 13;298(5601):2157-67.

PMID:
12481130
[PubMed - indexed for MEDLINE]
Free Article
6.

Loss of ancestral genes in the genomic evolution of Ciona intestinalis.

Hughes AL, Friedman R.

Evol Dev. 2005 May-Jun;7(3):196-200.

PMID:
15876192
[PubMed - indexed for MEDLINE]
7.

Genetic and genomic toolbox of the chordate Ciona intestinalis.

Stolfi A, Christiaen L.

Genetics. 2012 Sep;192(1):55-66. doi: 10.1534/genetics.112.140590. Review.

PMID:
22964837
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Gene number in an invertebrate chordate, Ciona intestinalis.

Simmen MW, Leitgeb S, Clark VH, Jones SJ, Bird A.

Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4437-40.

PMID:
9539755
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. VIII. Genes for PI3K signaling and cell cycle.

Kawashima T, Tokuoka M, Awazu S, Satoh N, Satou Y.

Dev Genes Evol. 2003 Jun;213(5-6):284-90. Epub 2003 May 13.

PMID:
12743821
[PubMed - indexed for MEDLINE]
10.

Globin genes are present in Ciona intestinalis.

Ebner B, Burmester T, Hankeln T.

Mol Biol Evol. 2003 Sep;20(9):1521-5. Epub 2003 Jun 27.

PMID:
12832645
[PubMed - indexed for MEDLINE]
Free Article
11.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. III. Genes for Fox, ETS, nuclear receptors and NFkappaB.

Yagi K, Satou Y, Mazet F, Shimeld SM, Degnan B, Rokhsar D, Levine M, Kohara Y, Satoh N.

Dev Genes Evol. 2003 Jun;213(5-6):235-44. Epub 2003 May 13.

PMID:
12743820
[PubMed - indexed for MEDLINE]
12.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. I. Genes for bHLH transcription factors.

Satou Y, Imai KS, Levine M, Kohara Y, Rokhsar D, Satoh N.

Dev Genes Evol. 2003 Jun;213(5-6):213-21. Epub 2003 May 8.

PMID:
12736824
[PubMed - indexed for MEDLINE]
13.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. II. Genes for homeobox transcription factors.

Wada S, Tokuoka M, Shoguchi E, Kobayashi K, Di Gregorio A, Spagnuolo A, Branno M, Kohara Y, Rokhsar D, Levine M, Saiga H, Satoh N, Satou Y.

Dev Genes Evol. 2003 Jun;213(5-6):222-34. Epub 2003 May 8.

PMID:
12736825
[PubMed - indexed for MEDLINE]
14.

A cDNA resource from the basal chordate Ciona intestinalis.

Satou Y, Yamada L, Mochizuki Y, Takatori N, Kawashima T, Sasaki A, Hamaguchi M, Awazu S, Yagi K, Sasakura Y, Nakayama A, Ishikawa H, Inaba K, Satoh N.

Genesis. 2002 Aug;33(4):153-4.

PMID:
12203911
[PubMed - indexed for MEDLINE]
15.
16.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. VI. Genes for Wnt, TGFbeta, Hedgehog and JAK/STAT signaling pathways.

Hino K, Satou Y, Yagi K, Satoh N.

Dev Genes Evol. 2003 Jun;213(5-6):264-72. Epub 2003 May 9.

PMID:
12739142
[PubMed - indexed for MEDLINE]
17.

Ciona intestinalis: chordate development made simple.

Passamaneck YJ, Di Gregorio A.

Dev Dyn. 2005 May;233(1):1-19. Review.

PMID:
15765512
[PubMed - indexed for MEDLINE]
Free Article
18.

Phylogenetic analysis of Ciona intestinalis gene superfamilies supports the hypothesis of successive gene expansions.

Leveugle M, Prat K, Popovici C, Birnbaum D, Coulier F.

J Mol Evol. 2004 Feb;58(2):168-81.

PMID:
15042337
[PubMed - indexed for MEDLINE]
19.

Huntingtin gene evolution in Chordata and its peculiar features in the ascidian Ciona genus.

Gissi C, Pesole G, Cattaneo E, Tartari M.

BMC Genomics. 2006 Nov 8;7:288.

PMID:
17092333
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. X. Genes for cell junctions and extracellular matrix.

Sasakura Y, Shoguchi E, Takatori N, Wada S, Meinertzhagen IA, Satou Y, Satoh N.

Dev Genes Evol. 2003 Jun;213(5-6):303-13. Epub 2003 May 10.

PMID:
12740697
[PubMed - indexed for MEDLINE]

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