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Results: 1 to 20 of 68

1.

Improved analytical methods for microarray-based genome-composition analysis.

Kim CC, Joyce EA, Chan K, Falkow S.

Genome Biol. 2002 Oct 29;3(11):RESEARCH0065. Epub 2002 Oct 29.

PMID:
12429064
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Comparative genome analysis of Campylobacter jejuni using whole genome DNA microarrays.

Pearson BM, Pin C, Wright J, I'Anson K, Humphrey T, Wells JM.

FEBS Lett. 2003 Nov 6;554(1-2):224-30.

PMID:
14596944
[PubMed - indexed for MEDLINE]
Free Article
3.

CGHScan: finding variable regions using high-density microarray comparative genomic hybridization data.

Anderson BD, Gilson MC, Scott AA, Biehl BS, Glasner JD, Rajashekara G, Splitter GA, Perna NT.

BMC Genomics. 2006 Apr 25;7:91.

PMID:
16638145
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

Dorrell N, Mangan JA, Laing KG, Hinds J, Linton D, Al-Ghusein H, Barrell BG, Parkhill J, Stoker NG, Karlyshev AV, Butcher PD, Wren BW.

Genome Res. 2001 Oct;11(10):1706-15.

PMID:
11591647
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparative analysis of four Campylobacterales.

Eppinger M, Baar C, Raddatz G, Huson DH, Schuster SC.

Nat Rev Microbiol. 2004 Nov;2(11):872-85. Review.

PMID:
15494744
[PubMed - indexed for MEDLINE]
7.

Helicobacter pylori genome variability in a framework of familial transmission.

Kivi M, Rodin S, Kupershmidt I, Lundin A, Tindberg Y, Granström M, Engstrand L.

BMC Microbiol. 2007 Jun 11;7:54.

PMID:
17562007
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Large-scale comparative genomics meta-analysis of Campylobacter jejuni isolates reveals low level of genome plasticity.

Taboada EN, Acedillo RR, Carrillo CD, Findlay WA, Medeiros DT, Mykytczuk OL, Roberts MJ, Valencia CA, Farber JM, Nash JH.

J Clin Microbiol. 2004 Oct;42(10):4566-76.

PMID:
15472310
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa.

Quiñones B, Guilhabert MR, Miller WG, Mandrell RE, Lastovica AJ, Parker CT.

PLoS One. 2008 Apr 23;3(4):e2015. doi: 10.1371/journal.pone.0002015.

PMID:
18431496
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Ab initio gene identification: prokaryote genome annotation with GeneScan and GLIMMER.

Aggarwal G, Ramaswamy R.

J Biosci. 2002 Feb;27(1 Suppl 1):7-14.

PMID:
11927773
[PubMed - indexed for MEDLINE]
Free Article
11.

Data rotation improves genomotyping efficiency.

Repsilber D, Mira A, Lindroos H, Andersson S, Ziegler A.

Biom J. 2005 Aug;47(4):585-98.

PMID:
16161813
[PubMed - indexed for MEDLINE]
12.

Methods for evaluating gene expression from Affymetrix microarray datasets.

Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.

BMC Bioinformatics. 2008 Jun 17;9:284. doi: 10.1186/1471-2105-9-284.

PMID:
18559105
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data.

Salamon H, Kato-Maeda M, Small PM, Drenkow J, Gingeras TR.

Genome Res. 2000 Dec;10(12):2044-54.

PMID:
11116098
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Strain-specific genes of Helicobacter pylori: distribution, function and dynamics.

Janssen PJ, Audit B, Ouzounis CA.

Nucleic Acids Res. 2001 Nov 1;29(21):4395-404.

PMID:
11691927
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

ArrayOme: a program for estimating the sizes of microarray-visualized bacterial genomes.

Ou HY, Smith R, Lucchini S, Hinton J, Chaudhuri RR, Pallen M, Barer MR, Rajakumar K.

Nucleic Acids Res. 2005 Jan 7;33(1):e3.

PMID:
15640440
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Numerical analysis of DNA microarray data of Campylobacter jejuni strains correlated with survival, cytolethal distending toxin and haemolysin analyses.

On SL, Dorrell N, Petersen L, Bang DD, Morris S, Forsythe SJ, Wren BW.

Int J Med Microbiol. 2006 Oct;296(6):353-63. Epub 2006 Jun 16.

PMID:
16782402
[PubMed - indexed for MEDLINE]
17.

Common genomic features of Campylobacter jejuni subsp. doylei strains distinguish them from C. jejuni subsp. jejuni.

Parker CT, Miller WG, Horn ST, Lastovica AJ.

BMC Microbiol. 2007 May 29;7:50.

PMID:
17535437
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Feature selection and classification for microarray data analysis: evolutionary methods for identifying predictive genes.

Jirapech-Umpai T, Aitken S.

BMC Bioinformatics. 2005 Jun 15;6:148.

PMID:
15958165
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

High-density rhesus macaque oligonucleotide microarray design using early-stage rhesus genome sequence information and human genome annotations.

Wallace JC, Korth MJ, Paeper B, Proll SC, Thomas MJ, Magness CL, Iadonato SP, Nelson C, Katze MG.

BMC Genomics. 2007 Jan 23;8:28.

PMID:
17244361
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.

Di X, Matsuzaki H, Webster TA, Hubbell E, Liu G, Dong S, Bartell D, Huang J, Chiles R, Yang G, Shen MM, Kulp D, Kennedy GC, Mei R, Jones KW, Cawley S.

Bioinformatics. 2005 May 1;21(9):1958-63. Epub 2005 Jan 18.

PMID:
15657097
[PubMed - indexed for MEDLINE]
Free Article

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