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Results: 1 to 20 of 104

1.

Permutation-validated principal components analysis of microarray data.

Landgrebe J, Wurst W, Welzl G.

Genome Biol. 2002;3(4):RESEARCH0019. Epub 2002 Mar 22.

PMID:
11983060
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Interpretation of ANOVA models for microarray data using PCA.

de Haan JR, Wehrens R, Bauerschmidt S, Piek E, van Schaik RC, Buydens LM.

Bioinformatics. 2007 Jan 15;23(2):184-90. Epub 2006 Nov 14.

PMID:
17105717
[PubMed - indexed for MEDLINE]
Free Article
3.

Analysis of strain and regional variation in gene expression in mouse brain.

Pavlidis P, Noble WS.

Genome Biol. 2001;2(10):RESEARCH0042. Epub 2001 Sep 27.

PMID:
11597334
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Microarray data analysis: a practical approach for selecting differentially expressed genes.

Mutch DM, Berger A, Mansourian R, Rytz A, Roberts MA.

Genome Biol. 2001;2(12):PREPRINT0009. Epub 2001 Nov 16.

PMID:
11790248
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A multivariate approach applied to microarray data for identification of genes with cell cycle-coupled transcription.

Johansson D, Lindgren P, Berglund A.

Bioinformatics. 2003 Mar 1;19(4):467-73.

PMID:
12611801
[PubMed - indexed for MEDLINE]
Free Article
6.

A framework to identify physiological responses in microarray-based gene expression studies: selection and interpretation of biologically relevant genes.

Rodenburg W, Heidema AG, Boer JM, Bovee-Oudenhoven IM, Feskens EJ, Mariman EC, Keijer J.

Physiol Genomics. 2008 Mar 14;33(1):78-90. Epub 2007 Dec 27.

PMID:
18162501
[PubMed - indexed for MEDLINE]
Free Article
7.

The Global Error Assessment (GEA) model for the selection of differentially expressed genes in microarray data.

Mansourian R, Mutch DM, Antille N, Aubert J, Fogel P, Le Goff JM, Moulin J, Petrov A, Rytz A, Voegel JJ, Roberts MA.

Bioinformatics. 2004 Nov 1;20(16):2726-37. Epub 2004 May 14.

PMID:
15145801
[PubMed - indexed for MEDLINE]
Free Article
8.

Group testing for pathway analysis improves comparability of different microarray datasets.

Manoli T, Gretz N, Gröne HJ, Kenzelmann M, Eils R, Brors B.

Bioinformatics. 2006 Oct 15;22(20):2500-6. Epub 2006 Aug 7.

PMID:
16895928
[PubMed - indexed for MEDLINE]
Free Article
9.
10.

Biologically valid linear factor models of gene expression.

Girolami M, Breitling R.

Bioinformatics. 2004 Nov 22;20(17):3021-33. Epub 2004 Jun 16.

PMID:
15201181
[PubMed - indexed for MEDLINE]
Free Article
11.

Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

BMC Genomics. 2006 Mar 21;7:59.

PMID:
16551369
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data.

Bartenhagen C, Klein HU, Ruckert C, Jiang X, Dugas M.

BMC Bioinformatics. 2010 Nov 18;11:567. doi: 10.1186/1471-2105-11-567.

PMID:
21087509
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The limit fold change model: a practical approach for selecting differentially expressed genes from microarray data.

Mutch DM, Berger A, Mansourian R, Rytz A, Roberts MA.

BMC Bioinformatics. 2002 Jun 21;3:17.

PMID:
12095422
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Bayesian hierarchical error model for analysis of gene expression data.

Cho H, Lee JK.

Bioinformatics. 2004 Sep 1;20(13):2016-25. Epub 2004 Mar 25.

PMID:
15044230
[PubMed - indexed for MEDLINE]
Free Article
15.

Methods for evaluating gene expression from Affymetrix microarray datasets.

Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.

BMC Bioinformatics. 2008 Jun 17;9:284. doi: 10.1186/1471-2105-9-284.

PMID:
18559105
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Hybrid genetic algorithm-neural network: feature extraction for unpreprocessed microarray data.

Tong DL, Schierz AC.

Artif Intell Med. 2011 Sep;53(1):47-56. doi: 10.1016/j.artmed.2011.06.008. Epub 2011 Jul 19.

PMID:
21775110
[PubMed - indexed for MEDLINE]
17.

Very Important Pool (VIP) genes--an application for microarray-based molecular signatures.

Su Z, Hong H, Fang H, Shi L, Perkins R, Tong W.

BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S9. doi: 10.1186/1471-2105-9-S9-S9.

PMID:
18793473
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation.

Comander J, Natarajan S, Gimbrone MA Jr, García-Cardeña G.

BMC Genomics. 2004 Feb 27;5(1):17.

PMID:
15113402
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A simple method for statistical analysis of intensity differences in microarray-derived gene expression data.

Kamb A, Ramaswami M.

BMC Biotechnol. 2001;1:8. Epub 2001 Oct 2.

PMID:
11690545
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data.

Jonnalagadda S, Srinivasan R.

BMC Bioinformatics. 2008 Jun 6;9:267. doi: 10.1186/1471-2105-9-267.

PMID:
18534040
[PubMed - indexed for MEDLINE]
Free PMC Article

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