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Results: 1 to 20 of 84

1.

Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome.

Kosarev P, Mayer KF, Hardtke CS.

Genome Biol. 2002;3(4):RESEARCH0016. Epub 2002 Mar 14.

PMID:
11983057
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes.

Baumbusch LO, Thorstensen T, Krauss V, Fischer A, Naumann K, Assalkhou R, Schulz I, Reuter G, Aalen RB.

Nucleic Acids Res. 2001 Nov 1;29(21):4319-33.

PMID:
11691919
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis.

Stone SL, Hauksdóttir H, Troy A, Herschleb J, Kraft E, Callis J.

Plant Physiol. 2005 Jan;137(1):13-30.

PMID:
15644464
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

[Comparative phylogenetic analysis of the rice and Arabidopsis PHD-finger proteins].

Feng Y, Liu QP, Xue QZ.

Yi Chuan Xue Bao. 2004 Nov;31(11):1284-93. Chinese.

PMID:
15651682
[PubMed - indexed for MEDLINE]
5.

Four distinct classes of proteins as interaction partners of the PABC domain of Arabidopsis thaliana Poly(A)-binding proteins.

Bravo J, Aguilar-Henonin L, Olmedo G, Guzmán P.

Mol Genet Genomics. 2005 Feb;272(6):651-65. Epub 2005 Jan 14.

PMID:
15650869
[PubMed - indexed for MEDLINE]
6.

Solution structure of the PHD domain from the KAP-1 corepressor: structural determinants for PHD, RING and LIM zinc-binding domains.

Capili AD, Schultz DC, RauscherIII FJ, Borden KL.

EMBO J. 2001 Jan 15;20(1-2):165-77.

PMID:
11226167
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Three-dimensional models of NB-ARC domains of disease resistance proteins in tomato, Arabidopsis, and flax.

Chattopadhyaya R, Pal A.

J Biomol Struct Dyn. 2008 Feb;25(4):357-71.

PMID:
18092830
[PubMed - indexed for MEDLINE]
8.

The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins.

Grasser M, Lentz A, Lichota J, Merkle T, Grasser KD.

J Mol Biol. 2006 May 5;358(3):654-64. Epub 2006 Mar 10.

PMID:
16563436
[PubMed - indexed for MEDLINE]
9.

Identification and structural characterization of FYVE domain-containing proteins of Arabidopsis thaliana.

Wywial E, Singh SM.

BMC Plant Biol. 2010 Aug 2;10:157. doi: 10.1186/1471-2229-10-157.

PMID:
20678208
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling.

Gookin TE, Kim J, Assmann SM.

Genome Biol. 2008;9(7):R120. doi: 10.1186/gb-2008-9-7-r120. Epub 2008 Jul 31.

PMID:
18671868
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The Arabidopsis basic/helix-loop-helix transcription factor family.

Toledo-Ortiz G, Huq E, Quail PH.

Plant Cell. 2003 Aug;15(8):1749-70.

PMID:
12897250
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Functional bioinformatics for Arabidopsis thaliana.

Clare A, Karwath A, Ougham H, King RD.

Bioinformatics. 2006 May 1;22(9):1130-6. Epub 2006 Feb 15. Erratum in: Bioinformatics. 2006 Jul 1;22(13):1674.

PMID:
16481336
[PubMed - indexed for MEDLINE]
Free Article
13.

Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.

Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.

Plant Physiol. 2006 Aug;141(4):1167-84.

PMID:
16896230
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity.

Milanesi L, Petrillo M, Sepe L, Boccia A, D'Agostino N, Passamano M, Di Nardo S, Tasco G, Casadio R, Paolella G.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S20.

PMID:
16351747
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genome-wide analysis of the RING finger gene family in apple.

Li Y, Wu B, Yu Y, Yang G, Wu C, Zheng C.

Mol Genet Genomics. 2011 Jul;286(1):81-94. doi: 10.1007/s00438-011-0625-0. Epub 2011 Jun 1.

PMID:
21630098
[PubMed - indexed for MEDLINE]
16.

The RING finger motif of photomorphogenic repressor COP1 specifically interacts with the RING-H2 motif of a novel Arabidopsis protein.

Torii KU, Stoop-Myer CD, Okamoto H, Coleman JE, Matsui M, Deng XW.

J Biol Chem. 1999 Sep 24;274(39):27674-81.

PMID:
10488108
[PubMed - indexed for MEDLINE]
Free Article
17.

Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

Baerenfaller K, Grossmann J, Grobei MA, Hull R, Hirsch-Hoffmann M, Yalovsky S, Zimmermann P, Grossniklaus U, Gruissem W, Baginsky S.

Science. 2008 May 16;320(5878):938-41. doi: 10.1126/science.1157956. Epub 2008 Apr 24.

PMID:
18436743
[PubMed - indexed for MEDLINE]
Free Article
18.

[Genome-wide identification, classification and expression analyses of SET domain gene family in Arabidopsis and rice].

Zhang LS, Ma CR, Ji Q, Wang YF.

Yi Chuan. 2009 Feb;31(2):186-98. Chinese.

PMID:
19273428
[PubMed - indexed for MEDLINE]
19.

The PHD domain of plant PIAS proteins mediates sumoylation of bromodomain GTE proteins.

Garcia-Dominguez M, March-Diaz R, Reyes JC.

J Biol Chem. 2008 Aug 1;283(31):21469-77. doi: 10.1074/jbc.M708176200. Epub 2008 May 23.

PMID:
18502747
[PubMed - indexed for MEDLINE]
Free Article
20.

Comparative analysis of protein domain organization.

Ye Y, Godzik A.

Genome Res. 2004 Mar;14(3):343-53.

PMID:
14993202
[PubMed - indexed for MEDLINE]
Free PMC Article

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