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Results: 1 to 20 of 155

1.

Evolution of gene order conservation in prokaryotes.

Tamames J.

Genome Biol. 2001;2(6):RESEARCH0020. Epub 2001 Jun 1.

PMID:
11423009
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.

Wolf YI, Rogozin IB, Kondrashov AS, Koonin EV.

Genome Res. 2001 Mar;11(3):356-72.

PMID:
11230160
[PubMed - indexed for MEDLINE]
Free Article
3.

Inferring functional relationships from conservation of gene order.

Moreno-Hagelsieb G.

Methods Mol Biol. 2008;453:181-99. doi: 10.1007/978-1-60327-429-6_8.

PMID:
18712303
[PubMed - indexed for MEDLINE]
4.

Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomes.

Rogozin IB, Makarova KS, Wolf YI, Koonin EV.

Brief Bioinform. 2004 Jun;5(2):131-49.

PMID:
15260894
[PubMed - indexed for MEDLINE]
Free Article
5.

Prokaryotic genomes: the emerging paradigm of genome-based microbiology.

Koonin EV, Galperin MY.

Curr Opin Genet Dev. 1997 Dec;7(6):757-63. Review.

PMID:
9468784
[PubMed - indexed for MEDLINE]
6.

Operon conservation from the point of view of Escherichia coli, and inference of functional interdependence of gene products from genome context.

Moreno-Hagelsieb G, Collado-Vides J.

In Silico Biol. 2002;2(2):87-95.

PMID:
12066843
[PubMed - indexed for MEDLINE]
7.

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Positional conservation of clusters of overlapping promoter-like sequences in enterobacterial genomes.

Huerta AM, Collado-Vides J, Francino MP; SMBE Tri-National Young Investigators.

Mol Biol Evol. 2006 May;23(5):997-1010. Epub 2006 Mar 17.

PMID:
16547149
[PubMed - indexed for MEDLINE]
Free Article
8.

Organisation of the S10, spc and alpha ribosomal protein gene clusters in prokaryotic genomes.

Coenye T, Vandamme P.

FEMS Microbiol Lett. 2005 Jan 1;242(1):117-26.

PMID:
15621428
[PubMed - indexed for MEDLINE]
9.

Multiple genome alignment for identifying the core structure among moderately related microbial genomes.

Uchiyama I.

BMC Genomics. 2008 Oct 31;9:515. doi: 10.1186/1471-2164-9-515.

PMID:
18976470
[PubMed - indexed for MEDLINE]
Free PMC Article
10.
11.

Ancient origin of the tryptophan operon and the dynamics of evolutionary change.

Xie G, Keyhani NO, Bonner CA, Jensen RA.

Microbiol Mol Biol Rev. 2003 Sep;67(3):303-42, table of contents. Review.

PMID:
12966138
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genomic and phylogenetic perspectives on the evolution of prokaryotes.

Brown JR.

Syst Biol. 2001 Aug;50(4):497-512. Review.

PMID:
12116649
[PubMed - indexed for MEDLINE]
13.

PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.

Fong C, Rohmer L, Radey M, Wasnick M, Brittnacher MJ.

BMC Bioinformatics. 2008 Mar 26;9:170. doi: 10.1186/1471-2105-9-170.

PMID:
18366802
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Detecting gene clusters under evolutionary constraint in a large number of genomes.

Ling X, He X, Xin D.

Bioinformatics. 2009 Mar 1;25(5):571-7. doi: 10.1093/bioinformatics/btp027. Epub 2009 Jan 21.

PMID:
19158161
[PubMed - indexed for MEDLINE]
Free Article
15.

A phylogenetic analysis of the pSymB replicon from the Sinorhizobium meliloti genome reveals a complex evolutionary history.

Wong K, Golding GB.

Can J Microbiol. 2003 Apr;49(4):269-80.

PMID:
12897836
[PubMed - indexed for MEDLINE]
16.

Evolution of gene fusions: horizontal transfer versus independent events.

Yanai I, Wolf YI, Koonin EV.

Genome Biol. 2002;3(5):research0024. Epub 2002 Apr 26.

PMID:
12049665
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Pervasiveness of gene conservation and persistence of duplicates in cellular genomes.

Tekaia F, Dujon B.

J Mol Evol. 1999 Nov;49(5):591-600.

PMID:
10552040
[PubMed - indexed for MEDLINE]
18.

[Compact genomes].

Forterre P.

Pathol Biol (Paris). 1998 Feb;46(2):92-5. French.

PMID:
9769917
[PubMed - indexed for MEDLINE]
19.

Statistical evidence for a more than 800-million-year-old evolutionarily conserved genomic region in our genome.

Danchin EG, Pontarotti P.

J Mol Evol. 2004 Nov;59(5):587-97.

PMID:
15693615
[PubMed - indexed for MEDLINE]
20.

Persistence drives gene clustering in bacterial genomes.

Fang G, Rocha EP, Danchin A.

BMC Genomics. 2008 Jan 7;9:4. doi: 10.1186/1471-2164-9-4.

PMID:
18179692
[PubMed - indexed for MEDLINE]
Free PMC Article

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