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Results: 1 to 20 of 110

1.

'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns.

Hastie T, Tibshirani R, Eisen MB, Alizadeh A, Levy R, Staudt L, Chan WC, Botstein D, Brown P.

Genome Biol. 2000;1(2):RESEARCH0003. Epub 2000 Aug 4.

PMID:
11178228
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study.

Wang J, Delabie J, Aasheim H, Smeland E, Myklebost O.

BMC Bioinformatics. 2002 Nov 24;3:36. Epub 2002 Nov 24.

PMID:
12445336
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Cluster stability scores for microarray data in cancer studies.

Smolkin M, Ghosh D.

BMC Bioinformatics. 2003 Sep 6;4:36. Epub 2003 Sep 6.

PMID:
12959646
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Algorithmic fusion of gene expression profiling for diffuse large B-cell lymphoma outcome prediction.

Zhu Q, Cui H, Cao K, Chan WC.

IEEE Trans Inf Technol Biomed. 2004 Jun;8(2):79-88.

PMID:
15217252
[PubMed - indexed for MEDLINE]
5.

The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma.

Rosenwald A, Wright G, Chan WC, Connors JM, Campo E, Fisher RI, Gascoyne RD, Muller-Hermelink HK, Smeland EB, Giltnane JM, Hurt EM, Zhao H, Averett L, Yang L, Wilson WH, Jaffe ES, Simon R, Klausner RD, Powell J, Duffey PL, Longo DL, Greiner TC, Weisenburger DD, Sanger WG, Dave BJ, Lynch JC, Vose J, Armitage JO, Montserrat E, López-Guillermo A, Grogan TM, Miller TP, LeBlanc M, Ott G, Kvaloy S, Delabie J, Holte H, Krajci P, Stokke T, Staudt LM; Lymphoma/Leukemia Molecular Profiling Project.

N Engl J Med. 2002 Jun 20;346(25):1937-47.

PMID:
12075054
[PubMed - indexed for MEDLINE]
Free Article
6.

A gene expression-based method to diagnose clinically distinct subgroups of diffuse large B cell lymphoma.

Wright G, Tan B, Rosenwald A, Hurt EH, Wiestner A, Staudt LM.

Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9991-6. Epub 2003 Aug 4.

PMID:
12900505
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Iterative class discovery and feature selection using Minimal Spanning Trees.

Varma S, Simon R.

BMC Bioinformatics. 2004 Sep 8;5:126.

PMID:
15355552
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Clinical quantitation of diagnostic and predictive gene expression levels in follicular and diffuse large B-cell lymphoma by RT-PCR gene expression profiling.

Sakhinia E, Glennie C, Hoyland JA, Menasce LP, Brady G, Miller C, Radford JA, Byers RJ.

Blood. 2007 May 1;109(9):3922-8. Epub 2007 Jan 25.

PMID:
17255358
[PubMed - indexed for MEDLINE]
Free Article
9.

Prediction of survival in diffuse large-B-cell lymphoma based on the expression of six genes.

Lossos IS, Czerwinski DK, Alizadeh AA, Wechser MA, Tibshirani R, Botstein D, Levy R.

N Engl J Med. 2004 Apr 29;350(18):1828-37.

PMID:
15115829
[PubMed - indexed for MEDLINE]
Free Article
10.

DNA microarray data and contextual analysis of correlation graphs.

Rougemont J, Hingamp P.

BMC Bioinformatics. 2003 Apr 29;4:15. Epub 2003 Apr 29.

PMID:
12720549
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Mining gene expression data by interpreting principal components.

Roden JC, King BW, Trout D, Mortazavi A, Wold BJ, Hart CE.

BMC Bioinformatics. 2006 Apr 7;7:194.

PMID:
16600052
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Molecular diagnosis and outcome prediction in diffuse large B-cell lymphoma and other subtypes of lymphoma.

Dybkaer K, Iqbal J, Zhou G, Chan WC.

Clin Lymphoma. 2004 Jun;5(1):19-28. Review.

PMID:
15245604
[PubMed - indexed for MEDLINE]
13.

K-ary clustering with optimal leaf ordering for gene expression data.

Bar-Joseph Z, Demaine ED, Gifford DK, Srebro N, Hamel AM, Jaakkola TS.

Bioinformatics. 2003 Jun 12;19(9):1070-8.

PMID:
12801867
[PubMed - indexed for MEDLINE]
Free Article
14.

Reliable classification of two-class cancer data using evolutionary algorithms.

Deb K, Raji Reddy A.

Biosystems. 2003 Nov;72(1-2):111-29.

PMID:
14642662
[PubMed - indexed for MEDLINE]
15.

Pathway analysis of informative genes from microarray data reveals that metabolism and signal transduction genes distinguish different subtypes of lymphomas.

Mircean C, Tabus I, Kobayashi T, Yamaguchi M, Shiku H, Shmulevich I, Zhang W.

Int J Oncol. 2004 Mar;24(3):497-504.

PMID:
14767533
[PubMed - indexed for MEDLINE]
16.
17.

Gene expression profiling in diffuse large B-cell lymphoma.

Morgensztern D, Martin MG, Lossos IS.

Leuk Lymphoma. 2007 Apr;48(4):669-82. Review.

PMID:
17454624
[PubMed - indexed for MEDLINE]
18.

NIFTI: an evolutionary approach for finding number of clusters in microarray data.

Jonnalagadda S, Srinivasan R.

BMC Bioinformatics. 2009 Jan 30;10:40. doi: 10.1186/1471-2105-10-40.

PMID:
19178750
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Microarrays--identifying molecular portraits for prostate tumors with different Gleason patterns.

Mendes A, Scott RJ, Moscato P.

Methods Mol Med. 2008;141:131-51. Review.

PMID:
18453088
[PubMed - indexed for MEDLINE]
20.

Partition decoupling for multi-gene analysis of gene expression profiling data.

Braun R, Leibon G, Pauls S, Rockmore D.

BMC Bioinformatics. 2011 Dec 30;12:497. doi: 10.1186/1471-2105-12-497.

PMID:
22208906
[PubMed - indexed for MEDLINE]
Free PMC Article

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