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Results: 1 to 20 of 91

1.

Tandem duplication of chromosomal segments is common in ovarian and breast cancer genomes.

McBride DJ, Etemadmoghadam D, Cooke SL, Alsop K, George J, Butler A, Cho J, Galappaththige D, Greenman C, Howarth KD, Lau KW, Ng CK, Raine K, Teague J, Wedge DC, Cancer Study Group AO, Caubit X, Stratton MR, Brenton JD, Campbell PJ, Futreal PA, Bowtell DD.

J Pathol. 2012 Aug;227(4):446-55. doi: 10.1002/path.4042. Epub 2012 Jul 2.

PMID:
22514011
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Mechanisms for recurrent and complex human genomic rearrangements.

Liu P, Carvalho CM, Hastings PJ, Lupski JR.

Curr Opin Genet Dev. 2012 Jun;22(3):211-20. doi: 10.1016/j.gde.2012.02.012. Epub 2012 Mar 20. Review.

PMID:
22440479
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

What have studies of genomic disorders taught us about our genome?

Simmons AD, Carvalho CM, Lupski JR.

Methods Mol Biol. 2012;838:1-27. doi: 10.1007/978-1-61779-507-7_1.

PMID:
22228005
[PubMed - indexed for MEDLINE]
4.

Common fragile sites: mechanisms of instability revisited.

Debatisse M, Le Tallec B, Letessier A, Dutrillaux B, Brison O.

Trends Genet. 2012 Jan;28(1):22-32. doi: 10.1016/j.tig.2011.10.003. Epub 2011 Nov 15. Review.

PMID:
22094264
[PubMed - indexed for MEDLINE]
5.

Quality control in the initiation of eukaryotic DNA replication.

Diffley JF.

Philos Trans R Soc Lond B Biol Sci. 2011 Dec 27;366(1584):3545-53. doi: 10.1098/rstb.2011.0073. Review.

PMID:
22084381
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

DNA replication: failures and inverted fusions.

Carr AM, Paek AL, Weinert T.

Semin Cell Dev Biol. 2011 Oct;22(8):866-74. doi: 10.1016/j.semcdb.2011.10.008. Epub 2011 Oct 18. Review.

PMID:
22020070
[PubMed - indexed for MEDLINE]
7.

Human copy number variation and complex genetic disease.

Girirajan S, Campbell CD, Eichler EE.

Annu Rev Genet. 2011;45:203-26. doi: 10.1146/annurev-genet-102209-163544. Epub 2011 Aug 19.

PMID:
21854229
[PubMed - indexed for MEDLINE]
8.

Mapping copy number variation by population-scale genome sequencing.

Mills RE, Walter K, Stewart C, Handsaker RE, Chen K, Alkan C, Abyzov A, Yoon SC, Ye K, Cheetham RK, Chinwalla A, Conrad DF, Fu Y, Grubert F, Hajirasouliha I, Hormozdiari F, Iakoucheva LM, Iqbal Z, Kang S, Kidd JM, Konkel MK, Korn J, Khurana E, Kural D, Lam HY, Leng J, Li R, Li Y, Lin CY, Luo R, Mu XJ, Nemesh J, Peckham HE, Rausch T, Scally A, Shi X, Stromberg MP, Stütz AM, Urban AE, Walker JA, Wu J, Zhang Y, Zhang ZD, Batzer MA, Ding L, Marth GT, McVean G, Sebat J, Snyder M, Wang J, Ye K, Eichler EE, Gerstein MB, Hurles ME, Lee C, McCarroll SA, Korbel JO; 1000 Genomes Project.

Nature. 2011 Feb 3;470(7332):59-65. doi: 10.1038/nature09708.

PMID:
21293372
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination.

Hoang ML, Tan FJ, Lai DC, Celniker SE, Hoskins RA, Dunham MJ, Zheng Y, Koshland D.

PLoS Genet. 2010 Dec 2;6(12):e1001228. doi: 10.1371/journal.pgen.1001228.

PMID:
21151956
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Loss of DNA replication control is a potent inducer of gene amplification.

Green BM, Finn KJ, Li JJ.

Science. 2010 Aug 20;329(5994):943-6. doi: 10.1126/science.1190966. Erratum in: Science. 2010 Oct 22;330(6003):448.

PMID:
20724634
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genomic rearrangements in inherited disease and cancer.

Chen JM, Cooper DN, Férec C, Kehrer-Sawatzki H, Patrinos GP.

Semin Cancer Biol. 2010 Aug;20(4):222-33. doi: 10.1016/j.semcancer.2010.05.007. Epub 2010 Jun 9. Review.

PMID:
20541013
[PubMed - indexed for MEDLINE]
12.

The landscape of somatic copy-number alteration across human cancers.

Beroukhim R, Mermel CH, Porter D, Wei G, Raychaudhuri S, Donovan J, Barretina J, Boehm JS, Dobson J, Urashima M, Mc Henry KT, Pinchback RM, Ligon AH, Cho YJ, Haery L, Greulich H, Reich M, Winckler W, Lawrence MS, Weir BA, Tanaka KE, Chiang DY, Bass AJ, Loo A, Hoffman C, Prensner J, Liefeld T, Gao Q, Yecies D, Signoretti S, Maher E, Kaye FJ, Sasaki H, Tepper JE, Fletcher JA, Tabernero J, Baselga J, Tsao MS, Demichelis F, Rubin MA, Janne PA, Daly MJ, Nucera C, Levine RL, Ebert BL, Gabriel S, Rustgi AK, Antonescu CR, Ladanyi M, Letai A, Garraway LA, Loda M, Beer DG, True LD, Okamoto A, Pomeroy SL, Singer S, Golub TR, Lander ES, Getz G, Sellers WR, Meyerson M.

Nature. 2010 Feb 18;463(7283):899-905. doi: 10.1038/nature08822.

PMID:
20164920
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A census of amplified and overexpressed human cancer genes.

Santarius T, Shipley J, Brewer D, Stratton MR, Cooper CS.

Nat Rev Cancer. 2010 Jan;10(1):59-64. doi: 10.1038/nrc2771.

PMID:
20029424
[PubMed - indexed for MEDLINE]
14.

The replication fork's five degrees of freedom, their failure and genome rearrangements.

Weinert T, Kaochar S, Jones H, Paek A, Clark AJ.

Curr Opin Cell Biol. 2009 Dec;21(6):778-84. doi: 10.1016/j.ceb.2009.10.004. Epub 2009 Nov 11. Review.

PMID:
19913398
[PubMed - indexed for MEDLINE]
15.

Mechanisms of change in gene copy number.

Hastings PJ, Lupski JR, Rosenberg SM, Ira G.

Nat Rev Genet. 2009 Aug;10(8):551-64. doi: 10.1038/nrg2593. Review.

PMID:
19597530
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A tale of tails: insights into the coordination of 3' end processing during homologous recombination.

Lyndaker AM, Alani E.

Bioessays. 2009 Mar;31(3):315-21. doi: 10.1002/bies.200800195. Review.

PMID:
19260026
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

A model for DNA replication showing how dormant origins safeguard against replication fork failure.

Blow JJ, Ge XQ.

EMBO Rep. 2009 Apr;10(4):406-12. doi: 10.1038/embor.2009.5. Epub 2009 Feb 13.

PMID:
19218919
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.

Richard GF, Kerrest A, Dujon B.

Microbiol Mol Biol Rev. 2008 Dec;72(4):686-727. doi: 10.1128/MMBR.00011-08. Review.

PMID:
19052325
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The temporal program of chromosome replication: genomewide replication in clb5{Delta} Saccharomyces cerevisiae.

McCune HJ, Danielson LS, Alvino GM, Collingwood D, Delrow JJ, Fangman WL, Brewer BJ, Raghuraman MK.

Genetics. 2008 Dec;180(4):1833-47. doi: 10.1534/genetics.108.094359. Epub 2008 Oct 1.

PMID:
18832352
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.

Zhu Z, Chung WH, Shim EY, Lee SE, Ira G.

Cell. 2008 Sep 19;134(6):981-94. doi: 10.1016/j.cell.2008.08.037.

PMID:
18805091
[PubMed - indexed for MEDLINE]
Free PMC Article

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