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Results: 1 to 20 of 42

1.

Single-molecule analysis of DNA replication in Xenopus egg extracts.

Yardimci H, Loveland AB, van Oijen AM, Walter JC.

Methods. 2012 Jun;57(2):179-86. doi: 10.1016/j.ymeth.2012.03.033. Epub 2012 Apr 6. Review.

PMID:
22503776
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Overcoming natural replication barriers: differential helicase requirements.

Anand RP, Shah KA, Niu H, Sung P, Mirkin SM, Freudenreich CH.

Nucleic Acids Res. 2012 Feb;40(3):1091-105. doi: 10.1093/nar/gkr836. Epub 2011 Oct 7.

PMID:
21984413
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Selective bypass of a lagging strand roadblock by the eukaryotic replicative DNA helicase.

Fu YV, Yardimci H, Long DT, Ho TV, Guainazzi A, Bermudez VP, Hurwitz J, van Oijen A, Schärer OD, Walter JC.

Cell. 2011 Sep 16;146(6):931-41. doi: 10.1016/j.cell.2011.07.045.

PMID:
21925316
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Simultaneous single-molecule measurements of phage T7 replisome composition and function reveal the mechanism of polymerase exchange.

Loparo JJ, Kulczyk AW, Richardson CC, van Oijen AM.

Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3584-9. doi: 10.1073/pnas.1018824108. Epub 2011 Jan 18.

PMID:
21245349
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Uncoupling of sister replisomes during eukaryotic DNA replication.

Yardimci H, Loveland AB, Habuchi S, van Oijen AM, Walter JC.

Mol Cell. 2010 Dec 10;40(5):834-40. doi: 10.1016/j.molcel.2010.11.027.

PMID:
21145490
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Conformational rearrangements of SV40 large T antigen during early replication events.

Cuesta I, Núñez-Ramírez R, Scheres SH, Gai D, Chen XS, Fanning E, Carazo JM.

J Mol Biol. 2010 Apr 16;397(5):1276-86. doi: 10.1016/j.jmb.2010.02.042. Epub 2010 Feb 26.

PMID:
20219473
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

SV40 DNA replication: from the A gene to a nanomachine.

Fanning E, Zhao K.

Virology. 2009 Feb 20;384(2):352-9. doi: 10.1016/j.virol.2008.11.038. Epub 2008 Dec 20. Review.

PMID:
19101707
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Labeling of unique sequences in double-stranded DNA at sites of vicinal nicks generated by nicking endonucleases.

Kuhn H, Frank-Kamenetskii MD.

Nucleic Acids Res. 2008 Apr;36(7):e40. doi: 10.1093/nar/gkn107. Epub 2008 Mar 15.

PMID:
18344522
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

On helicases and other motor proteins.

Enemark EJ, Joshua-Tor L.

Curr Opin Struct Biol. 2008 Apr;18(2):243-57. doi: 10.1016/j.sbi.2008.01.007. Epub 2008 Mar 10. Review.

PMID:
18329872
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Mechanism of DNA translocation in a replicative hexameric helicase.

Enemark EJ, Joshua-Tor L.

Nature. 2006 Jul 20;442(7100):270-5.

PMID:
16855583
[PubMed - indexed for MEDLINE]
11.

Lysis timing and bacteriophage fitness.

Wang IN.

Genetics. 2006 Jan;172(1):17-26. Epub 2005 Oct 11.

PMID:
16219778
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Pumps, paradoxes and ploughshares: mechanism of the MCM2-7 DNA helicase.

Takahashi TS, Wigley DB, Walter JC.

Trends Biochem Sci. 2005 Aug;30(8):437-44.

PMID:
16002295
[PubMed - indexed for MEDLINE]
13.

DNA synthesis provides the driving force to accelerate DNA unwinding by a helicase.

Stano NM, Jeong YJ, Donmez I, Tummalapalli P, Levin MK, Patel SS.

Nature. 2005 May 19;435(7040):370-3.

PMID:
15902262
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

DNA-protein crosslinks: their induction, repair, and biological consequences.

Barker S, Weinfeld M, Murray D.

Mutat Res. 2005 Mar;589(2):111-35. Epub 2005 Jan 5. Review.

PMID:
15795165
[PubMed - indexed for MEDLINE]
15.

Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.

Gai D, Zhao R, Li D, Finkielstein CV, Chen XS.

Cell. 2004 Oct 1;119(1):47-60.

PMID:
15454080
[PubMed - indexed for MEDLINE]
16.

Two heads are better than one: regulation of DNA replication by hexameric helicases.

Sclafani RA, Fletcher RJ, Chen XS.

Genes Dev. 2004 Sep 1;18(17):2039-45. Review. No abstract available.

PMID:
15342486
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Twin DNA pumps of a hexameric helicase provide power to simultaneously melt two duplexes.

Kaplan DL, O'Donnell M.

Mol Cell. 2004 Aug 13;15(3):453-65.

PMID:
15304224
[PubMed - indexed for MEDLINE]
18.

Large T antigen on the simian virus 40 origin of replication: a 3D snapshot prior to DNA replication.

Gomez-Lorenzo MG, Valle M, Frank J, Gruss C, Sorzano CO, Chen XS, Donate LE, Carazo JM.

EMBO J. 2003 Dec 1;22(23):6205-13.

PMID:
14633980
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Mcm4,6,7 uses a "pump in ring" mechanism to unwind DNA by steric exclusion and actively translocate along a duplex.

Kaplan DL, Davey MJ, O'Donnell M.

J Biol Chem. 2003 Dec 5;278(49):49171-82. Epub 2003 Sep 17.

PMID:
13679365
[PubMed - indexed for MEDLINE]
Free Article
20.

Structure of the replicative helicase of the oncoprotein SV40 large tumour antigen.

Li D, Zhao R, Lilyestrom W, Gai D, Zhang R, DeCaprio JA, Fanning E, Jochimiak A, Szakonyi G, Chen XS.

Nature. 2003 May 29;423(6939):512-8.

PMID:
12774115
[PubMed - indexed for MEDLINE]

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