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Results: 1 to 20 of 63

References for PMC Articles for PubMed (Select 23193264)

1.

The NIH genetic testing registry: a new, centralized database of genetic tests to enable access to comprehensive information and improve transparency.

Rubinstein WS, Maglott DR, Lee JM, Kattman BL, Malheiro AJ, Ovetsky M, Hem V, Gorelenkov V, Song G, Wallin C, Husain N, Chitipiralla S, Katz KS, Hoffman D, Jang W, Johnson M, Karmanov F, Ukrainchik A, Denisenko M, Fomous C, Hudson K, Ostell JM.

Nucleic Acids Res. 2013 Jan;41(Database issue):D925-35. doi: 10.1093/nar/gks1173. Epub 2012 Nov 27.

2.

Clone DB: an integrated NCBI resource for clone-associated data.

Schneider VA, Chen HC, Clausen C, Meric PA, Zhou Z, Bouk N, Husain N, Maglott DR, Church DM.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1070-8. doi: 10.1093/nar/gks1164. Epub 2012 Nov 27.

3.

NCBI GEO: archive for functional genomics data sets--update.

Barrett T, Wilhite SE, Ledoux P, Evangelista C, Kim IF, Tomashevsky M, Marshall KA, Phillippy KH, Sherman PM, Holko M, Yefanov A, Lee H, Zhang N, Robertson CL, Serova N, Davis S, Soboleva A.

Nucleic Acids Res. 2013 Jan;41(Database issue):D991-5. doi: 10.1093/nar/gks1193. Epub 2012 Nov 27.

4.

Domain enhanced lookup time accelerated BLAST.

Boratyn GM, Schäffer AA, Agarwala R, Altschul SF, Lipman DJ, Madden TL.

Biol Direct. 2012 Apr 17;7:12. doi: 10.1186/1745-6150-7-12.

5.

GenBank.

Benson DA, Karsch-Mizrachi I, Clark K, Lipman DJ, Ostell J, Sayers EW.

Nucleic Acids Res. 2012 Jan;40(Database issue):D48-53. doi: 10.1093/nar/gkr1202. Epub 2011 Dec 5.

6.

PubChem's BioAssay Database.

Wang Y, Xiao J, Suzek TO, Zhang J, Wang J, Zhou Z, Han L, Karapetyan K, Dracheva S, Shoemaker BA, Bolton E, Gindulyte A, Bryant SH.

Nucleic Acids Res. 2012 Jan;40(Database issue):D400-12. doi: 10.1093/nar/gkr1132. Epub 2011 Dec 2.

7.

BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata.

Barrett T, Clark K, Gevorgyan R, Gorelenkov V, Gribov E, Karsch-Mizrachi I, Kimelman M, Pruitt KD, Resenchuk S, Tatusova T, Yaschenko E, Ostell J.

Nucleic Acids Res. 2012 Jan;40(Database issue):D57-63. doi: 10.1093/nar/gkr1163. Epub 2011 Dec 1.

8.

The NCBI Taxonomy database.

Federhen S.

Nucleic Acids Res. 2012 Jan;40(Database issue):D136-43. doi: 10.1093/nar/gkr1178. Epub 2011 Dec 1.

9.

MMDB: 3D structures and macromolecular interactions.

Madej T, Addess KJ, Fong JH, Geer LY, Geer RC, Lanczycki CJ, Liu C, Lu S, Marchler-Bauer A, Panchenko AR, Chen J, Thiessen PA, Wang Y, Zhang D, Bryant SH.

Nucleic Acids Res. 2012 Jan;40(Database issue):D461-4. doi: 10.1093/nar/gkr1162. Epub 2011 Dec 1.

10.

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy.

Pruitt KD, Tatusova T, Brown GR, Maglott DR.

Nucleic Acids Res. 2012 Jan;40(Database issue):D130-5. doi: 10.1093/nar/gkr1079. Epub 2011 Nov 24.

11.

The Sequence Read Archive: explosive growth of sequencing data.

Kodama Y, Shumway M, Leinonen R; International Nucleotide Sequence Database Collaboration.

Nucleic Acids Res. 2012 Jan;40(Database issue):D54-6. doi: 10.1093/nar/gkr854. Epub 2011 Oct 18.

12.

UniProt Knowledgebase: a hub of integrated protein data.

Magrane M, Consortium U.

Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011.

13.

Entrez Gene: gene-centered information at NCBI.

Maglott D, Ostell J, Pruitt KD, Tatusova T.

Nucleic Acids Res. 2011 Jan;39(Database issue):D52-7. doi: 10.1093/nar/gkq1237. Epub 2010 Nov 28.

14.

CDD: a Conserved Domain Database for the functional annotation of proteins.

Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Lu F, Marchler GH, Mullokandov M, Omelchenko MV, Robertson CL, Song JS, Thanki N, Yamashita RA, Zhang D, Zhang N, Zheng C, Bryant SH.

Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24.

15.

NCBI Epigenomics: a new public resource for exploring epigenomic data sets.

Fingerman IM, McDaniel L, Zhang X, Ratzat W, Hassan T, Jiang Z, Cohen RF, Schuler GD.

Nucleic Acids Res. 2011 Jan;39(Database issue):D908-12. doi: 10.1093/nar/gkq1146. Epub 2010 Nov 12.

16.

Diversity of human copy number variation and multicopy genes.

Sudmant PH, Kitzman JO, Antonacci F, Alkan C, Malig M, Tsalenko A, Sampas N, Bruhn L, Shendure J; 1000 Genomes Project, Eichler EE.

Science. 2010 Oct 29;330(6004):641-6. doi: 10.1126/science.1197005.

17.

Public data archives for genomic structural variation.

Church DM, Lappalainen I, Sneddon TP, Hinton J, Maguire M, Lopez J, Garner J, Paschall J, DiCuccio M, Yaschenko E, Scherer SW, Feuk L, Flicek P.

Nat Genet. 2010 Oct;42(10):813-4. doi: 10.1038/ng1010-813. No abstract available.

18.

Mining biological pathways using WikiPathways web services.

Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR.

PLoS One. 2009 Jul 30;4(7):e6447. doi: 10.1371/journal.pone.0006447.

19.

Internet resources in medical genetics.

Waggoner DJ, Pagon RA.

Curr Protoc Hum Genet. 2009 Jul;Chapter 9:Unit 9.12. doi: 10.1002/0471142905.hg0912s62.

PMID:
19582767
20.

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes.

Pruitt KD, Harrow J, Harte RA, Wallin C, Diekhans M, Maglott DR, Searle S, Farrell CM, Loveland JE, Ruef BJ, Hart E, Suner MM, Landrum MJ, Aken B, Ayling S, Baertsch R, Fernandez-Banet J, Cherry JL, Curwen V, Dicuccio M, Kellis M, Lee J, Lin MF, Schuster M, Shkeda A, Amid C, Brown G, Dukhanina O, Frankish A, Hart J, Maidak BL, Mudge J, Murphy MR, Murphy T, Rajan J, Rajput B, Riddick LD, Snow C, Steward C, Webb D, Weber JA, Wilming L, Wu W, Birney E, Haussler D, Hubbard T, Ostell J, Durbin R, Lipman D.

Genome Res. 2009 Jul;19(7):1316-23. doi: 10.1101/gr.080531.108. Epub 2009 Jun 4. Erratum in: Genome Res. 2009 Aug;19(8):1506.

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