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Items: 1 to 20 of 46

1.

The Medicago genome provides insight into the evolution of rhizobial symbioses.

Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Dai X, Doyle JJ, Dudez AM, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, Goldstein S, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray SJ, Jeong DH, Jing Y, Jöcker A, Kenton SM, Kim DJ, Klee K, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun JH, Najar FZ, Nicholson C, Noirot C, O'Bleness M, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Sanders I, Saurat O, Scarpelli C, Schiex T, Segurens B, Severin AJ, Sherrier DJ, Shi R, Sims S, Singer SR, Sinharoy S, Sterck L, Viollet A, Wang BB, Wang K, Wang M, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA.

Nature. 2011 Nov 16;480(7378):520-4. doi: 10.1038/nature10625.

2.

Root nodulation: a paradigm for how plant-microbe symbiosis influences host developmental pathways.

Desbrosses GJ, Stougaard J.

Cell Host Microbe. 2011 Oct 20;10(4):348-58. doi: 10.1016/j.chom.2011.09.005. Review.

3.

Phylogeny and character evolution in Medicago (Leguminosae): Evidence from analyses of plastid trnK/matK and nuclear GA3ox1 sequences.

Steele KP, Ickert-Bond SM, Zarre S, Wojciechowski MF.

Am J Bot. 2010 Jul;97(7):1142-55. doi: 10.3732/ajb.1000009.

4.

Genome sequence of the palaeopolyploid soybean.

Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D, Hellsten U, May GD, Yu Y, Sakurai T, Umezawa T, Bhattacharyya MK, Sandhu D, Valliyodan B, Lindquist E, Peto M, Grant D, Shu S, Goodstein D, Barry K, Futrell-Griggs M, Abernathy B, Du J, Tian Z, Zhu L, Gill N, Joshi T, Libault M, Sethuraman A, Zhang XC, Shinozaki K, Nguyen HT, Wing RA, Cregan P, Specht J, Grimwood J, Rokhsar D, Stacey G, Shoemaker RC, Jackson SA.

Nature. 2010 Jan 14;463(7278):178-83. doi: 10.1038/nature08670. Erratum in: Nature. 2010 May 6;465(7294):120.

PMID:
20075913
5.

The evolution of gene duplications: classifying and distinguishing between models.

Innan H, Kondrashov F.

Nat Rev Genet. 2010 Feb;11(2):97-108. doi: 10.1038/nrg2689. Epub 2010 Jan 6. Review.

PMID:
20051986
6.

Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium).

Chaudhary B, Flagel L, Stupar RM, Udall JA, Verma N, Springer NM, Wendel JF.

Genetics. 2009 Jun;182(2):503-17. doi: 10.1534/genetics.109.102608. Epub 2009 Apr 10.

7.

Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice.

Yang Z, Gu S, Wang X, Li W, Tang Z, Xu C.

J Mol Evol. 2008 Sep;67(3):266-77. doi: 10.1007/s00239-008-9143-z. Epub 2008 Aug 12.

PMID:
18696028
8.

Escape from adaptive conflict after duplication in an anthocyanin pathway gene.

Des Marais DL, Rausher MD.

Nature. 2008 Aug 7;454(7205):762-5. doi: 10.1038/nature07092. Epub 2008 Jun 25.

PMID:
18594508
9.

The reticulate history of Medicago (Fabaceae).

Maureira-Butler IJ, Pfeil BE, Muangprom A, Osborn TC, Doyle JJ.

Syst Biol. 2008 Jun;57(3):466-82. doi: 10.1080/10635150802172168.

PMID:
18570039
10.

Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization.

Chain FJ, Ilieva D, Evans BJ.

BMC Evol Biol. 2008 Feb 8;8:43. doi: 10.1186/1471-2148-8-43.

11.

Gene duplication and the adaptive evolution of a classic genetic switch.

Hittinger CT, Carroll SB.

Nature. 2007 Oct 11;449(7163):677-81.

PMID:
17928853
12.

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.

Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyère C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pè ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quétier F, Wincker P; French-Italian Public Consortium for Grapevine Genome Characterization.

Nature. 2007 Sep 27;449(7161):463-7. Epub 2007 Aug 26.

PMID:
17721507
14.

The evolutionary fate of recently duplicated retrogenes in mice.

Gayral P, Caminade P, Boursot P, Galtier N.

J Evol Biol. 2007 Mar;20(2):617-26.

15.

Evolution of duplicate gene expression in polyploid and hybrid plants.

Adams KL.

J Hered. 2007 Mar-Apr;98(2):136-41. Epub 2007 Jan 5. Review.

16.

Patterns of expansion and expression divergence in the plant polygalacturonase gene family.

Kim J, Shiu SH, Thoma S, Li WH, Patterson SE.

Genome Biol. 2006;7(9):R87.

17.

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).

Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D.

Science. 2006 Sep 15;313(5793):1596-604.

18.

Widespread genome duplications throughout the history of flowering plants.

Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, dePamphilis CW.

Genome Res. 2006 Jun;16(6):738-49. Epub 2006 May 15.

19.

Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana.

Casneuf T, De Bodt S, Raes J, Maere S, Van de Peer Y.

Genome Biol. 2006;7(2):R13. Epub 2006 Feb 20.

20.

Molecular evolution and positive selection of the symbiotic gene NORK in Medicago truncatula.

De Mita S, Santoni S, Hochu I, Ronfort J, Bataillon T.

J Mol Evol. 2006 Feb;62(2):234-44. Epub 2006 Feb 10.

PMID:
16474986
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