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Items: 1 to 20 of 35

1.

Pathway-based identification of a smoking associated 6-gene signature predictive of lung cancer risk and survival.

Guo NL, Wan YW.

Artif Intell Med. 2012 Jun;55(2):97-105. doi: 10.1016/j.artmed.2012.01.001. Epub 2012 Feb 11.

2.

EGFR mutations in non-small-cell lung cancer among smokers and non-smokers: a meta-analysis.

Ren JH, He WS, Yan GL, Jin M, Yang KY, Wu G.

Environ Mol Mutagen. 2012 Jan;53(1):78-82. doi: 10.1002/em.20680. Epub 2011 Aug 29.

PMID:
22223435
3.

Signaling pathway-based identification of extensive prognostic gene signatures for lung adenocarcinoma.

Wan YW, Beer DG, Guo NL.

Lung Cancer. 2012 Apr;76(1):98-105. doi: 10.1016/j.lungcan.2011.09.016. Epub 2011 Nov 1.

4.

A novel network model identified a 13-gene lung cancer prognostic signature.

Guo NL, Wan YW, Bose S, Denvir J, Kashon ML, Andrew ME.

Int J Comput Biol Drug Des. 2011;4(1):19-39. doi: 10.1504/IJCBDD.2011.038655. Epub 2011 Feb 17.

5.

Impact and interactions between smoking and traditional prognostic factors in lung cancer progression.

Guo NL, Tosun K, Horn K.

Lung Cancer. 2009 Dec;66(3):386-92. doi: 10.1016/j.lungcan.2009.02.012. Epub 2009 Mar 21.

6.

STRING 8--a global view on proteins and their functional interactions in 630 organisms.

Jensen LJ, Kuhn M, Stark M, Chaffron S, Creevey C, Muller J, Doerks T, Julien P, Roth A, Simonovic M, Bork P, von Mering C.

Nucleic Acids Res. 2009 Jan;37(Database issue):D412-6. doi: 10.1093/nar/gkn760. Epub 2008 Oct 21.

7.

Smoking-related genomic signatures in non-small cell lung cancer.

Massion PP, Zou Y, Chen H, Jiang A, Coulson P, Amos CI, Wu X, Wistuba I, Wei Q, Shyr Y, Spitz MR.

Am J Respir Crit Care Med. 2008 Dec 1;178(11):1164-72. doi: 10.1164/rccm.200801-142OC. Epub 2008 Sep 5.

8.

Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study.

Director's Challenge Consortium for the Molecular Classification of Lung Adenocarcinoma, Shedden K, Taylor JM, Enkemann SA, Tsao MS, Yeatman TJ, Gerald WL, Eschrich S, Jurisica I, Giordano TJ, Misek DE, Chang AC, Zhu CQ, Strumpf D, Hanash S, Shepherd FA, Ding K, Seymour L, Naoki K, Pennell N, Weir B, Verhaak R, Ladd-Acosta C, Golub T, Gruidl M, Sharma A, Szoke J, Zakowski M, Rusch V, Kris M, Viale A, Motoi N, Travis W, Conley B, Seshan VE, Meyerson M, Kuick R, Dobbin KK, Lively T, Jacobson JW, Beer DG.

Nat Med. 2008 Aug;14(8):822-7. doi: 10.1038/nm.1790. Epub 2008 Jul 20.

9.

Automating dChip: toward reproducible sharing of microarray data analysis.

Li C.

BMC Bioinformatics. 2008 May 8;9:231. doi: 10.1186/1471-2105-9-231.

10.

A susceptibility locus for lung cancer maps to nicotinic acetylcholine receptor subunit genes on 15q25.

Hung RJ, McKay JD, Gaborieau V, Boffetta P, Hashibe M, Zaridze D, Mukeria A, Szeszenia-Dabrowska N, Lissowska J, Rudnai P, Fabianova E, Mates D, Bencko V, Foretova L, Janout V, Chen C, Goodman G, Field JK, Liloglou T, Xinarianos G, Cassidy A, McLaughlin J, Liu G, Narod S, Krokan HE, Skorpen F, Elvestad MB, Hveem K, Vatten L, Linseisen J, Clavel-Chapelon F, Vineis P, Bueno-de-Mesquita HB, Lund E, Martinez C, Bingham S, Rasmuson T, Hainaut P, Riboli E, Ahrens W, Benhamou S, Lagiou P, Trichopoulos D, Holcátová I, Merletti F, Kjaerheim K, Agudo A, Macfarlane G, Talamini R, Simonato L, Lowry R, Conway DI, Znaor A, Healy C, Zelenika D, Boland A, Delepine M, Foglio M, Lechner D, Matsuda F, Blanche H, Gut I, Heath S, Lathrop M, Brennan P.

Nature. 2008 Apr 3;452(7187):633-7. doi: 10.1038/nature06885.

PMID:
18385738
11.

A systems biology approach to prediction of oncogenes and molecular perturbation targets in B-cell lymphomas.

Mani KM, Lefebvre C, Wang K, Lim WK, Basso K, Dalla-Favera R, Califano A.

Mol Syst Biol. 2008;4:169. doi: 10.1038/msb.2008.2. Epub 2008 Feb 12.

12.

A map of human cancer signaling.

Cui Q, Ma Y, Jaramillo M, Bari H, Awan A, Yang S, Zhang S, Liu L, Lu M, O'Connor-McCourt M, Purisima EO, Wang E.

Mol Syst Biol. 2007;3:152. Epub 2007 Dec 18.

13.

Construction of a reference gene association network from multiple profiling data: application to data analysis.

Ucar D, Neuhaus I, Ross-MacDonald P, Tilford C, Parthasarathy S, Siemers N, Ji RR.

Bioinformatics. 2007 Oct 15;23(20):2716-24. Epub 2007 Sep 10.

14.

Airway epithelial gene expression in the diagnostic evaluation of smokers with suspect lung cancer.

Spira A, Beane JE, Shah V, Steiling K, Liu G, Schembri F, Gilman S, Dumas YM, Calner P, Sebastiani P, Sridhar S, Beamis J, Lamb C, Anderson T, Gerry N, Keane J, Lenburg ME, Brody JS.

Nat Med. 2007 Mar;13(3):361-6. Epub 2007 Mar 4.

PMID:
17334370
15.

Entrez Gene: gene-centered information at NCBI.

Maglott D, Ostell J, Pruitt KD, Tatusova T.

Nucleic Acids Res. 2007 Jan;35(Database issue):D26-31. Epub 2006 Dec 5.

16.

Smoking and cancer-related gene expression in bronchial epithelium and non-small-cell lung cancers.

Woenckhaus M, Klein-Hitpass L, Grepmeier U, Merk J, Pfeifer M, Wild P, Bettstetter M, Wuensch P, Blaszyk H, Hartmann A, Hofstaedter F, Dietmaier W.

J Pathol. 2006 Oct;210(2):192-204.

PMID:
16915569
17.

Gene expression signatures for predicting prognosis of squamous cell and adenocarcinomas of the lung.

Raponi M, Zhang Y, Yu J, Chen G, Lee G, Taylor JM, Macdonald J, Thomas D, Moskaluk C, Wang Y, Beer DG.

Cancer Res. 2006 Aug 1;66(15):7466-72.

18.

Genetic susceptibility to lung cancer.

Christiani DC.

J Clin Oncol. 2006 Apr 10;24(11):1651-2. Epub 2006 Mar 20. No abstract available.

19.

Oncogenic pathway signatures in human cancers as a guide to targeted therapies.

Bild AH, Yao G, Chang JT, Wang Q, Potti A, Chasse D, Joshi MB, Harpole D, Lancaster JM, Berchuck A, Olson JA Jr, Marks JR, Dressman HK, West M, Nevins JR.

Nature. 2006 Jan 19;439(7074):353-7. Epub 2005 Nov 6.

PMID:
16273092
20.

Differential coexpression analysis using microarray data and its application to human cancer.

Choi JK, Yu U, Yoo OJ, Kim S.

Bioinformatics. 2005 Dec 15;21(24):4348-55. Epub 2005 Oct 18.

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