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Results: 1 to 20 of 96

References for PMC Articles for PubMed (Select 22685560)

1.

Influenza A virus coding regions exhibit host-specific global ordered RNA structure.

Priore SF, Moss WN, Turner DH.

PLoS One. 2012;7(4):e35989. doi: 10.1371/journal.pone.0035989. Epub 2012 Apr 25.

2.

Testing the nearest neighbor model for canonical RNA base pairs: revision of GU parameters.

Chen JL, Dishler AL, Kennedy SD, Yildirim I, Liu B, Turner DH, Serra MJ.

Biochemistry. 2012 Apr 24;51(16):3508-22. doi: 10.1021/bi3002709. Epub 2012 Apr 10.

3.

Pause on avian flu transmission studies.

Fouchier RA, GarcĂ­a-Sastre A, Kawaoka Y.

Nature. 2012 Jan 20;481(7382):443. doi: 10.1038/481443a. No abstract available.

PMID:
22266939
4.

Tiling genomes of pathogenic viruses identifies potent antiviral shRNAs and reveals a role for secondary structure in shRNA efficacy.

Tan X, Lu ZJ, Gao G, Xu Q, Hu L, Fellmann C, Li MZ, Qu H, Lowe SW, Hannon GJ, Elledge SJ.

Proc Natl Acad Sci U S A. 2012 Jan 17;109(3):869-74. doi: 10.1073/pnas.1119873109. Epub 2012 Jan 4.

5.

Comprehensive survey and geometric classification of base triples in RNA structures.

Abu Almakarem AS, Petrov AI, Stombaugh J, Zirbel CL, Leontis NB.

Nucleic Acids Res. 2012 Feb;40(4):1407-23. doi: 10.1093/nar/gkr810. Epub 2011 Nov 3.

6.

siRNA for Influenza Therapy.

Barik S.

Viruses. 2010 Jul;2(7):1448-57. doi: 10.3390/v2071448. Epub 2010 Jul 9.

7.

The accumulation of influenza A virus segment 7 spliced mRNAs is regulated by the NS1 protein.

Robb NC, Fodor E.

J Gen Virol. 2012 Jan;93(Pt 1):113-8. doi: 10.1099/vir.0.035485-0. Epub 2011 Sep 14.

PMID:
21918006
8.

NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions.

Lerman YV, Kennedy SD, Shankar N, Parisien M, Major F, Turner DH.

RNA. 2011 Sep;17(9):1664-77. doi: 10.1261/rna.2641911. Epub 2011 Jul 21.

9.

Identification of potential conserved RNA secondary structure throughout influenza A coding regions.

Moss WN, Priore SF, Turner DH.

RNA. 2011 Jun;17(6):991-1011. doi: 10.1261/rna.2619511. Epub 2011 May 2.

10.

A flexible RNA backbone within the polypyrimidine tract is required for U2AF65 binding and pre-mRNA splicing in vivo.

Chen C, Zhao X, Kierzek R, Yu YT.

Mol Cell Biol. 2010 Sep;30(17):4108-19. doi: 10.1128/MCB.00531-10. Epub 2010 Jul 6.

12.

Biochemical characterization of enzyme fidelity of influenza A virus RNA polymerase complex.

Aggarwal S, Bradel-Tretheway B, Takimoto T, Dewhurst S, Kim B.

PLoS One. 2010 Apr 29;5(4):e10372. doi: 10.1371/journal.pone.0010372.

13.

A family of non-classical pseudoknots in influenza A and B viruses.

Gultyaev AP, Olsthoorn RC.

RNA Biol. 2010 Mar-Apr;7(2):125-9. Epub 2010 Mar 25.

PMID:
20200490
14.

Designing inhibitors of M2 proton channel against H1N1 swine influenza virus.

Du QS, Huang RB, Wang SQ, Chou KC.

PLoS One. 2010 Feb 23;5(2):e9388. doi: 10.1371/journal.pone.0009388.

15.

Predicting loop-helix tertiary structural contacts in RNA pseudoknots.

Cao S, Giedroc DP, Chen SJ.

RNA. 2010 Mar;16(3):538-52. doi: 10.1261/rna.1800210. Epub 2010 Jan 25.

16.

Role of RNA structure in regulating pre-mRNA splicing.

Warf MB, Berglund JA.

Trends Biochem Sci. 2010 Mar;35(3):169-78. doi: 10.1016/j.tibs.2009.10.004. Epub 2009 Dec 1. Review.

17.

Temperature sensitivity on growth and/or replication of H1N1, H1N2 and H3N2 influenza A viruses isolated from pigs and birds in mammalian cells.

Massin P, Kuntz-Simon G, Barbezange C, Deblanc C, Oger A, Marquet-Blouin E, Bougeard S, van der Werf S, Jestin V.

Vet Microbiol. 2010 May 19;142(3-4):232-41. doi: 10.1016/j.vetmic.2009.10.012. Epub 2009 Oct 28.

PMID:
19926410
18.

NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure.

Turner DH, Mathews DH.

Nucleic Acids Res. 2010 Jan;38(Database issue):D280-2. doi: 10.1093/nar/gkp892. Epub 2009 Oct 30.

19.
20.

The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing.

Warf MB, Diegel JV, von Hippel PH, Berglund JA.

Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9203-8. doi: 10.1073/pnas.0900342106. Epub 2009 May 26.

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