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Results: 1 to 20 of 44

1.

Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation.

Pilon AM, Ajay SS, Kumar SA, Steiner LA, Cherukuri PF, Wincovitch S, Anderson SM; NISC Comparative Sequencing Center, Mullikin JC, Gallagher PG, Hardison RC, Margulies EH, Bodine DM.

Blood. 2011 Oct 27;118(17):e139-48. doi: 10.1182/blood-2011-05-355107. Epub 2011 Sep 6.

PMID:
21900194
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration.

Wu W, Cheng Y, Keller CA, Ernst J, Kumar SA, Mishra T, Morrissey C, Dorman CM, Chen KB, Drautz D, Giardine B, Shibata Y, Song L, Pimkin M, Crawford GE, Furey TS, Kellis M, Miller W, Taylor J, Schuster SC, Zhang Y, Chiaromonte F, Blobel GA, Weiss MJ, Hardison RC.

Genome Res. 2011 Oct;21(10):1659-71. doi: 10.1101/gr.125088.111. Epub 2011 Jul 27.

PMID:
21795386
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Functional and mechanistic diversity of distal transcription enhancers.

Bulger M, Groudine M.

Cell. 2011 Feb 4;144(3):327-39. doi: 10.1016/j.cell.2011.01.024. Review. Erratum in: Cell. 2011 Mar 4;144(5):825.

PMID:
21295696
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages.

Palii CG, Perez-Iratxeta C, Yao Z, Cao Y, Dai F, Davison J, Atkins H, Allan D, Dilworth FJ, Gentleman R, Tapscott SJ, Brand M.

EMBO J. 2011 Feb 2;30(3):494-509. doi: 10.1038/emboj.2010.342. Epub 2010 Dec 21.

PMID:
21179004
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation.

Nechaev S, Adelman K.

Biochim Biophys Acta. 2011 Jan;1809(1):34-45. doi: 10.1016/j.bbagrm.2010.11.001. Epub 2010 Nov 13. Review.

PMID:
21081187
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Multiple functions of Ldb1 required for beta-globin activation during erythroid differentiation.

Song SH, Kim A, Ragoczy T, Bender MA, Groudine M, Dean A.

Blood. 2010 Sep 30;116(13):2356-64. doi: 10.1182/blood-2010-03-272252. Epub 2010 Jun 22.

PMID:
20570862
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation.

Soler E, Andrieu-Soler C, de Boer E, Bryne JC, Thongjuea S, Stadhouders R, Palstra RJ, Stevens M, Kockx C, van Ijcken W, Hou J, Steinhoff C, Rijkers E, Lenhard B, Grosveld F.

Genes Dev. 2010 Feb 1;24(3):277-89. doi: 10.1101/gad.551810. Erratum in: Genes Dev. 2010 Mar 15;24(6):623.

PMID:
20123907
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells.

Schoenfelder S, Sexton T, Chakalova L, Cope NF, Horton A, Andrews S, Kurukuti S, Mitchell JA, Umlauf D, Dimitrova DS, Eskiw CH, Luo Y, Wei CL, Ruan Y, Bieker JJ, Fraser P.

Nat Genet. 2010 Jan;42(1):53-61. doi: 10.1038/ng.496. Epub 2009 Dec 13.

PMID:
20010836
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Functional autonomy of distant-acting human enhancers.

Visel A, Akiyama JA, Shoukry M, Afzal V, Rubin EM, Pennacchio LA.

Genomics. 2009 Jun;93(6):509-13. doi: 10.1016/j.ygeno.2009.02.002. Epub 2009 Mar 5.

PMID:
19268701
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation.

Ragoczy T, Bender MA, Telling A, Byron R, Groudine M.

Genes Dev. 2006 Jun 1;20(11):1447-57. Epub 2006 May 16.

PMID:
16705039
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Flanking HS-62.5 and 3' HS1, and regions upstream of the LCR, are not required for beta-globin transcription.

Bender MA, Byron R, Ragoczy T, Telling A, Bulger M, Groudine M.

Blood. 2006 Aug 15;108(4):1395-401. Epub 2006 Apr 27.

PMID:
16645164
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation.

Yamada T, Yamaguchi Y, Inukai N, Okamoto S, Mura T, Handa H.

Mol Cell. 2006 Jan 20;21(2):227-37.

PMID:
16427012
[PubMed - indexed for MEDLINE]
Free Article
13.

Deletion of the core region of 5' HS2 of the mouse beta-globin locus control region reveals a distinct effect in comparison with human beta-globin transgenes.

Hu X, Bulger M, Bender MA, Fields J, Groudine M, Fiering S.

Blood. 2006 Jan 15;107(2):821-6. Epub 2005 Sep 27.

PMID:
16189270
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Active genes dynamically colocalize to shared sites of ongoing transcription.

Osborne CS, Chakalova L, Brown KE, Carter D, Horton A, Debrand E, Goyenechea B, Mitchell JA, Lopes S, Reik W, Fraser P.

Nat Genet. 2004 Oct;36(10):1065-71. Epub 2004 Sep 7.

PMID:
15361872
[PubMed - indexed for MEDLINE]
Free Article
15.

RNA fluorescence in situ hybridization tagging and recovery of associated proteins to analyze in vivo chromatin interactions.

Chakalova L, Carter D, Fraser P.

Methods Enzymol. 2004;375:479-93. No abstract available.

PMID:
14870684
[PubMed - indexed for MEDLINE]
16.

Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo.

Saunders A, Werner J, Andrulis ED, Nakayama T, Hirose S, Reinberg D, Lis JT.

Science. 2003 Aug 22;301(5636):1094-6.

PMID:
12934007
[PubMed - indexed for MEDLINE]
Free Article
17.

The beta -globin locus control region (LCR) functions primarily by enhancing the transition from transcription initiation to elongation.

Sawado T, Halow J, Bender MA, Groudine M.

Genes Dev. 2003 Apr 15;17(8):1009-18. Epub 2003 Apr 2.

PMID:
12672691
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Beta-globin locus control region HS2 and HS3 interact structurally and functionally.

Jackson DA, McDowell JC, Dean A.

Nucleic Acids Res. 2003 Feb 15;31(4):1180-90.

PMID:
12582237
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Locus control regions.

Li Q, Peterson KR, Fang X, Stamatoyannopoulos G.

Blood. 2002 Nov 1;100(9):3077-86. Review.

PMID:
12384402
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Targeted deletion of 5'HS1 and 5'HS4 of the beta-globin locus control region reveals additive activity of the DNaseI hypersensitive sites.

Bender MA, Roach JN, Halow J, Close J, Alami R, Bouhassira EE, Groudine M, Fiering SN.

Blood. 2001 Oct 1;98(7):2022-7.

PMID:
11567985
[PubMed - indexed for MEDLINE]
Free Article

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