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References for PMC Articles for PubMed (Select 22312418)


Optimizing a rodent model of Parkinson's disease for exploring the effects and mechanisms of deep brain stimulation.

Nowak K, Mix E, Gimsa J, Strauss U, Sriperumbudur KK, Benecke R, Gimsa U.

Parkinsons Dis. 2011;2011:414682. doi: 10.4061/2011/414682. Epub 2011 Apr 5.


Application of machine learning methods to describe the effects of conjugated equine estrogens therapy on region-specific brain volumes.

Casanova R, Espeland MA, Goveas JS, Davatzikos C, Gaussoin SA, Maldjian JA, Brunner RL, Kuller LH, Johnson KC, Mysiw WJ, Wagner B, Resnick SM; Women's Health Initiative Memory Study.

Magn Reson Imaging. 2011 May;29(4):546-53. doi: 10.1016/j.mri.2010.12.001. Epub 2011 Feb 2.


Classification of Alzheimer disease, mild cognitive impairment, and normal cognitive status with large-scale network analysis based on resting-state functional MR imaging.

Chen G, Ward BD, Xie C, Li W, Wu Z, Jones JL, Franczak M, Antuono P, Li SJ.

Radiology. 2011 Apr;259(1):213-21. doi: 10.1148/radiol.10100734. Epub 2011 Jan 19.


Regularization Paths for Generalized Linear Models via Coordinate Descent.

Friedman J, Hastie T, Tibshirani R.

J Stat Softw. 2010;33(1):1-22.


Describing the brain in autism in five dimensions--magnetic resonance imaging-assisted diagnosis of autism spectrum disorder using a multiparameter classification approach.

Ecker C, Marquand A, Mourão-Miranda J, Johnston P, Daly EM, Brammer MJ, Maltezos S, Murphy CM, Robertson D, Williams SC, Murphy DG.

J Neurosci. 2010 Aug 11;30(32):10612-23. doi: 10.1523/JNEUROSCI.5413-09.2010.


Hemisphere- and gender-related differences in small-world brain networks: a resting-state functional MRI study.

Tian L, Wang J, Yan C, He Y.

Neuroimage. 2011 Jan 1;54(1):191-202. doi: 10.1016/j.neuroimage.2010.07.066. Epub 2010 Aug 3.


Using coherence to measure regional homogeneity of resting-state FMRI signal.

Liu D, Yan C, Ren J, Yao L, Kiviniemi VJ, Zang Y.

Front Syst Neurosci. 2010 Jun 17;4:24. doi: 10.3389/fnsys.2010.00024. eCollection 2010.


Decoding brain states from fMRI connectivity graphs.

Richiardi J, Eryilmaz H, Schwartz S, Vuilleumier P, Van De Ville D.

Neuroimage. 2011 May 15;56(2):616-26. doi: 10.1016/j.neuroimage.2010.05.081. Epub 2010 Jun 9.


Sparse logistic regression for whole-brain classification of fMRI data.

Ryali S, Supekar K, Abrams DA, Menon V.

Neuroimage. 2010 Jun;51(2):752-64. doi: 10.1016/j.neuroimage.2010.02.040. Epub 2010 Feb 24.


Toward discovery science of human brain function.

Biswal BB, Mennes M, Zuo XN, Gohel S, Kelly C, Smith SM, Beckmann CF, Adelstein JS, Buckner RL, Colcombe S, Dogonowski AM, Ernst M, Fair D, Hampson M, Hoptman MJ, Hyde JS, Kiviniemi VJ, Kötter R, Li SJ, Lin CP, Lowe MJ, Mackay C, Madden DJ, Madsen KH, Margulies DS, Mayberg HS, McMahon K, Monk CS, Mostofsky SH, Nagel BJ, Pekar JJ, Peltier SJ, Petersen SE, Riedl V, Rombouts SA, Rypma B, Schlaggar BL, Schmidt S, Seidler RD, Siegle GJ, Sorg C, Teng GJ, Veijola J, Villringer A, Walter M, Wang L, Weng XC, Whitfield-Gabrieli S, Williamson P, Windischberger C, Zang YF, Zhang HY, Castellanos FX, Milham MP.

Proc Natl Acad Sci U S A. 2010 Mar 9;107(10):4734-9. doi: 10.1073/pnas.0911855107. Epub 2010 Feb 22.


Linking brain-wide multivoxel activation patterns to behaviour: Examples from language and math.

Raizada RD, Tsao FM, Liu HM, Holloway ID, Ansari D, Kuhl PK.

Neuroimage. 2010 May 15;51(1):462-71. doi: 10.1016/j.neuroimage.2010.01.080. Epub 2010 Feb 2.


Comparison of characteristics between region-and voxel-based network analyses in resting-state fMRI data.

Hayasaka S, Laurienti PJ.

Neuroimage. 2010 Apr 1;50(2):499-508. doi: 10.1016/j.neuroimage.2009.12.051. Epub 2009 Dec 21.


Disease state prediction from resting state functional connectivity.

Craddock RC, Holtzheimer PE 3rd, Hu XP, Mayberg HS.

Magn Reson Med. 2009 Dec;62(6):1619-28. doi: 10.1002/mrm.22159.


Hemispheric asymmetry in cognitive division of anterior cingulate cortex: a resting-state functional connectivity study.

Yan H, Zuo XN, Wang D, Wang J, Zhu C, Milham MP, Zhang D, Zang Y.

Neuroimage. 2009 Oct 1;47(4):1579-89. doi: 10.1016/j.neuroimage.2009.05.080. Epub 2009 Jun 6.


Generic aspects of complexity in brain imaging data and other biological systems.

Bullmore E, Barnes A, Bassett DS, Fornito A, Kitzbichler M, Meunier D, Suckling J.

Neuroimage. 2009 Sep;47(3):1125-34. doi: 10.1016/j.neuroimage.2009.05.032. Epub 2009 May 19. Review.


Complex brain networks: graph theoretical analysis of structural and functional systems.

Bullmore E, Sporns O.

Nat Rev Neurosci. 2009 Mar;10(3):186-98. doi: 10.1038/nrn2575. Epub 2009 Feb 4. Review. Erratum in: Nat Rev Neurosci. 2009 Apr;10(4):312.


Predicting RNA-binding sites of proteins using support vector machines and evolutionary information.

Cheng CW, Su EC, Hwang JK, Sung TY, Hsu WL.

BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S6. doi: 10.1186/1471-2105-9-S12-S6.


Machine learning classifiers and fMRI: a tutorial overview.

Pereira F, Mitchell T, Botvinick M.

Neuroimage. 2009 Mar;45(1 Suppl):S199-209. doi: 10.1016/j.neuroimage.2008.11.007. Epub 2008 Nov 21. Review.


Sex differences in the brain response to affective scenes with or without humans.

Proverbio AM, Adorni R, Zani A, Trestianu L.

Neuropsychologia. 2009 Oct;47(12):2374-88. doi: 10.1016/j.neuropsychologia.2008.10.030. Epub 2008 Nov 17.


Small-world and scale-free organization of voxel-based resting-state functional connectivity in the human brain.

van den Heuvel MP, Stam CJ, Boersma M, Hulshoff Pol HE.

Neuroimage. 2008 Nov 15;43(3):528-39. doi: 10.1016/j.neuroimage.2008.08.010. Epub 2008 Aug 22.

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