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Items: 1 to 20 of 23

1.

Molecular signatures database (MSigDB) 3.0.

Liberzon A, Subramanian A, Pinchback R, Thorvaldsdóttir H, Tamayo P, Mesirov JP.

Bioinformatics. 2011 Jun 15;27(12):1739-40. doi: 10.1093/bioinformatics/btr260. Epub 2011 May 5.

2.

Ensembl 2011.

Flicek P, Amode MR, Barrell D, Beal K, Brent S, Chen Y, Clapham P, Coates G, Fairley S, Fitzgerald S, Gordon L, Hendrix M, Hourlier T, Johnson N, Kähäri A, Keefe D, Keenan S, Kinsella R, Kokocinski F, Kulesha E, Larsson P, Longden I, McLaren W, Overduin B, Pritchard B, Riat HS, Rios D, Ritchie GR, Ruffier M, Schuster M, Sobral D, Spudich G, Tang YA, Trevanion S, Vandrovcova J, Vilella AJ, White S, Wilder SP, Zadissa A, Zamora J, Aken BL, Birney E, Cunningham F, Dunham I, Durbin R, Fernández-Suarez XM, Herrero J, Hubbard TJ, Parker A, Proctor G, Vogel J, Searle SM.

Nucleic Acids Res. 2011 Jan;39(Database issue):D800-6. doi: 10.1093/nar/gkq1064. Epub 2010 Nov 2.

3.

Statistical methods for pathway analysis of genome-wide data for association with complex genetic traits.

Holmans P.

Adv Genet. 2010;72:141-79. doi: 10.1016/B978-0-12-380862-2.00007-2. Review.

PMID:
21029852
4.

Strong synaptic transmission impact by copy number variations in schizophrenia.

Glessner JT, Reilly MP, Kim CE, Takahashi N, Albano A, Hou C, Bradfield JP, Zhang H, Sleiman PM, Flory JH, Imielinski M, Frackelton EC, Chiavacci R, Thomas KA, Garris M, Otieno FG, Davidson M, Weiser M, Reichenberg A, Davis KL, Friedman JI, Cappola TP, Margulies KB, Rader DJ, Grant SF, Buxbaum JD, Gur RE, Hakonarson H.

Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10584-9. doi: 10.1073/pnas.1000274107. Epub 2010 May 20.

5.

A new bioinformatics analysis tools framework at EMBL-EBI.

Goujon M, McWilliam H, Li W, Valentin F, Squizzato S, Paern J, Lopez R.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W695-9. doi: 10.1093/nar/gkq313. Epub 2010 May 3.

6.

To build a synapse: signaling pathways in neuromuscular junction assembly.

Wu H, Xiong WC, Mei L.

Development. 2010 Apr;137(7):1017-33. doi: 10.1242/dev.038711. Review.

7.

The architecture of an excitatory synapse.

Chua JJ, Kindler S, Boyken J, Jahn R.

J Cell Sci. 2010 Mar 15;123(Pt 6):819-23. doi: 10.1242/jcs.052696. Review. No abstract available.

8.

Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.

Shyn SI, Shi J, Kraft JB, Potash JB, Knowles JA, Weissman MM, Garriock HA, Yokoyama JS, McGrath PJ, Peters EJ, Scheftner WA, Coryell W, Lawson WB, Jancic D, Gejman PV, Sanders AR, Holmans P, Slager SL, Levinson DF, Hamilton SP.

Mol Psychiatry. 2011 Feb;16(2):202-15. doi: 10.1038/mp.2009.125. Epub 2009 Dec 29.

9.

Systems approach to explore components and interactions in the presynapse.

Abul-Husn NS, Bushlin I, Morón JA, Jenkins SL, Dolios G, Wang R, Iyengar R, Ma'ayan A, Devi LA.

Proteomics. 2009 Jun;9(12):3303-15. doi: 10.1002/pmic.200800767.

10.

Association study of PDE4B gene variants in Scandinavian schizophrenia and bipolar disorder multicenter case-control samples.

Kähler AK, Otnaess MK, Wirgenes KV, Hansen T, Jönsson EG, Agartz I, Hall H, Werge T, Morken G, Mors O, Mellerup E, Dam H, Koefod P, Melle I, Steen VM, Andreassen OA, Djurovic S.

Am J Med Genet B Neuropsychiatr Genet. 2010 Jan 5;153B(1):86-96. doi: 10.1002/ajmg.b.30958.

PMID:
19350560
11.

bioDBnet: the biological database network.

Mudunuri U, Che A, Yi M, Stephens RM.

Bioinformatics. 2009 Feb 15;25(4):555-6. doi: 10.1093/bioinformatics/btn654. Epub 2009 Jan 7.

12.

Human Protein Reference Database--2009 update.

Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, Kumar S, Mathivanan S, Telikicherla D, Raju R, Shafreen B, Venugopal A, Balakrishnan L, Marimuthu A, Banerjee S, Somanathan DS, Sebastian A, Rani S, Ray S, Harrys Kishore CJ, Kanth S, Ahmed M, Kashyap MK, Mohmood R, Ramachandra YL, Krishna V, Rahiman BA, Mohan S, Ranganathan P, Ramabadran S, Chaerkady R, Pandey A.

Nucleic Acids Res. 2009 Jan;37(Database issue):D767-72. doi: 10.1093/nar/gkn892. Epub 2008 Nov 6.

13.

Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.

Ferreira MA, O'Donovan MC, Meng YA, Jones IR, Ruderfer DM, Jones L, Fan J, Kirov G, Perlis RH, Green EK, Smoller JW, Grozeva D, Stone J, Nikolov I, Chambert K, Hamshere ML, Nimgaonkar VL, Moskvina V, Thase ME, Caesar S, Sachs GS, Franklin J, Gordon-Smith K, Ardlie KG, Gabriel SB, Fraser C, Blumenstiel B, Defelice M, Breen G, Gill M, Morris DW, Elkin A, Muir WJ, McGhee KA, Williamson R, MacIntyre DJ, MacLean AW, St CD, Robinson M, Van Beck M, Pereira AC, Kandaswamy R, McQuillin A, Collier DA, Bass NJ, Young AH, Lawrence J, Ferrier IN, Anjorin A, Farmer A, Curtis D, Scolnick EM, McGuffin P, Daly MJ, Corvin AP, Holmans PA, Blackwood DH, Gurling HM, Owen MJ, Purcell SM, Sklar P, Craddock N; Wellcome Trust Case Control Consortium.

Nat Genet. 2008 Sep;40(9):1056-8. doi: 10.1038/ng.209.

14.

Novel de novo SHANK3 mutation in autistic patients.

Gauthier J, Spiegelman D, Piton A, Lafrenière RG, Laurent S, St-Onge J, Lapointe L, Hamdan FF, Cossette P, Mottron L, Fombonne E, Joober R, Marineau C, Drapeau P, Rouleau GA.

Am J Med Genet B Neuropsychiatr Genet. 2009 Apr 5;150B(3):421-4. doi: 10.1002/ajmg.b.30822.

PMID:
18615476
15.

Systematic meta-analyses and field synopsis of genetic association studies in schizophrenia: the SzGene database.

Allen NC, Bagade S, McQueen MB, Ioannidis JP, Kavvoura FK, Khoury MJ, Tanzi RE, Bertram L.

Nat Genet. 2008 Jul;40(7):827-34. doi: 10.1038/ng.171.

PMID:
18583979
16.

Overlapping probabilities of top ranking gene lists, hypergeometric distribution, and stringency of gene selection criterion.

Fury W, Batliwalla F, Gregersen PK, Li W.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:5531-4.

PMID:
17947148
17.

Systematic meta-analyses of Alzheimer disease genetic association studies: the AlzGene database.

Bertram L, McQueen MB, Mullin K, Blacker D, Tanzi RE.

Nat Genet. 2007 Jan;39(1):17-23.

PMID:
17192785
18.

SynDB: a Synapse protein DataBase based on synapse ontology.

Zhang W, Zhang Y, Zheng H, Zhang C, Xiong W, Olyarchuk JG, Walker M, Xu W, Zhao M, Zhao S, Zhou Z, Wei L.

Nucleic Acids Res. 2007 Jan;35(Database issue):D737-41. Epub 2006 Nov 10.

19.

GeneKeyDB: a lightweight, gene-centric, relational database to support data mining environments.

Kirov SA, Peng X, Baker E, Schmoyer D, Zhang B, Snoddy J.

BMC Bioinformatics. 2005 Mar 24;6:72.

20.

STRING: a database of predicted functional associations between proteins.

von Mering C, Huynen M, Jaeggi D, Schmidt S, Bork P, Snel B.

Nucleic Acids Res. 2003 Jan 1;31(1):258-61.

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