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Results: 1 to 20 of 76

1.

PEAS V1.0: a package for elementary analysis of SNP data.

Xu S, Gupta S, Jin L.

Mol Ecol Resour. 2010 Nov;10(6):1085-8. doi: 10.1111/j.1755-0998.2010.02862.x.

PMID:
21565121
[PubMed]
2.

Integrating common and rare genetic variation in diverse human populations.

International HapMap 3 Consortium, Altshuler DM, Gibbs RA, Peltonen L, Altshuler DM, Gibbs RA, Peltonen L, Dermitzakis E, Schaffner SF, Yu F, Peltonen L, Dermitzakis E, Bonnen PE, Altshuler DM, Gibbs RA, de Bakker PI, Deloukas P, Gabriel SB, Gwilliam R, Hunt S, Inouye M, Jia X, Palotie A, Parkin M, Whittaker P, Yu F, Chang K, Hawes A, Lewis LR, Ren Y, Wheeler D, Gibbs RA, Muzny DM, Barnes C, Darvishi K, Hurles M, Korn JM, Kristiansson K, Lee C, McCarrol SA, Nemesh J, Dermitzakis E, Keinan A, Montgomery SB, Pollack S, Price AL, Soranzo N, Bonnen PE, Gibbs RA, Gonzaga-Jauregui C, Keinan A, Price AL, Yu F, Anttila V, Brodeur W, Daly MJ, Leslie S, McVean G, Moutsianas L, Nguyen H, Schaffner SF, Zhang Q, Ghori MJ, McGinnis R, McLaren W, Pollack S, Price AL, Schaffner SF, Takeuchi F, Grossman SR, Shlyakhter I, Hostetter EB, Sabeti PC, Adebamowo CA, Foster MW, Gordon DR, Licinio J, Manca MC, Marshall PA, Matsuda I, Ngare D, Wang VO, Reddy D, Rotimi CN, Royal CD, Sharp RR, Zeng C, Brooks LD, McEwen JE.

Nature. 2010 Sep 2;467(7311):52-8. doi: 10.1038/nature09298.

PMID:
20811451
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

New genetic associations detected in a host response study to hepatitis B vaccine.

Davila S, Froeling FE, Tan A, Bonnard C, Boland GJ, Snippe H, Hibberd ML, Seielstad M.

Genes Immun. 2010 Apr;11(3):232-8. doi: 10.1038/gene.2010.1. Epub 2010 Mar 18.

PMID:
20237496
[PubMed - indexed for MEDLINE]
4.

Anti-inflammatory effect of MUC1 during respiratory syncytial virus infection of lung epithelial cells in vitro.

Li Y, Dinwiddie DL, Harrod KS, Jiang Y, Kim KC.

Am J Physiol Lung Cell Mol Physiol. 2010 Apr;298(4):L558-63. doi: 10.1152/ajplung.00225.2009. Epub 2010 Jan 15.

PMID:
20081068
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Genome-wide patterns of population structure and admixture in West Africans and African Americans.

Bryc K, Auton A, Nelson MR, Oksenberg JR, Hauser SL, Williams S, Froment A, Bodo JM, Wambebe C, Tishkoff SA, Bustamante CD.

Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):786-91. doi: 10.1073/pnas.0909559107. Epub 2009 Dec 22.

PMID:
20080753
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Characterizing the admixed African ancestry of African Americans.

Zakharia F, Basu A, Absher D, Assimes TL, Go AS, Hlatky MA, Iribarren C, Knowles JW, Li J, Narasimhan B, Sidney S, Southwick A, Myers RM, Quertermous T, Risch N, Tang H.

Genome Biol. 2009;10(12):R141. doi: 10.1186/gb-2009-10-12-r141. Epub 2009 Dec 22.

PMID:
20025784
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genome-wide scans for footprints of natural selection.

Oleksyk TK, Smith MW, O'Brien SJ.

Philos Trans R Soc Lond B Biol Sci. 2010 Jan 12;365(1537):185-205. doi: 10.1098/rstb.2009.0219. Review.

PMID:
20008396
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The cleavage of semaphorin 3C induced by ADAMTS1 promotes cell migration.

Esselens C, Malapeira J, Colomé N, Casal C, Rodríguez-Manzaneque JC, Canals F, Arribas J.

J Biol Chem. 2010 Jan 22;285(4):2463-73. doi: 10.1074/jbc.M109.055129. Epub 2009 Nov 13.

PMID:
19915008
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

CD36 and TLR interactions in inflammation and phagocytosis: implications for malaria.

Erdman LK, Cosio G, Helmers AJ, Gowda DC, Grinstein S, Kain KC.

J Immunol. 2009 Nov 15;183(10):6452-9. doi: 10.4049/jimmunol.0901374. Epub 2009 Oct 28.

PMID:
19864601
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Mechanisms of protein kinase PKR-mediated amplification of beta interferon induction by C protein-deficient measles virus.

McAllister CS, Toth AM, Zhang P, Devaux P, Cattaneo R, Samuel CE.

J Virol. 2010 Jan;84(1):380-6. doi: 10.1128/JVI.02630-08. Epub .

PMID:
19846517
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Novel role for the double-stranded RNA-activated protein kinase PKR: modulation of macrophage infection by the protozoan parasite Leishmania.

Pereira RM, Teixeira KL, Barreto-de-Souza V, Calegari-Silva TC, De-Melo LD, Soares DC, Bou-Habib DC, Silva AM, Saraiva EM, Lopes UG.

FASEB J. 2010 Feb;24(2):617-26. doi: 10.1096/fj.09-140053. Epub 2009 Oct 7.

PMID:
19812373
[PubMed - indexed for MEDLINE]
Free Article
12.

Identification of a new prostate cancer susceptibility locus on chromosome 8q24.

Yeager M, Chatterjee N, Ciampa J, Jacobs KB, Gonzalez-Bosquet J, Hayes RB, Kraft P, Wacholder S, Orr N, Berndt S, Yu K, Hutchinson A, Wang Z, Amundadottir L, Feigelson HS, Thun MJ, Diver WR, Albanes D, Virtamo J, Weinstein S, Schumacher FR, Cancel-Tassin G, Cussenot O, Valeri A, Andriole GL, Crawford ED, Haiman CA, Henderson B, Kolonel L, Le Marchand L, Siddiq A, Riboli E, Key TJ, Kaaks R, Isaacs W, Isaacs S, Wiley KE, Gronberg H, Wiklund F, Stattin P, Xu J, Zheng SL, Sun J, Vatten LJ, Hveem K, Kumle M, Tucker M, Gerhard DS, Hoover RN, Fraumeni JF Jr, Hunter DJ, Thomas G, Chanock SJ.

Nat Genet. 2009 Oct;41(10):1055-7. doi: 10.1038/ng.444. Epub 2009 Sep 20.

PMID:
19767755
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Multiple loci on 8q24 associated with prostate cancer susceptibility.

Al Olama AA, Kote-Jarai Z, Giles GG, Guy M, Morrison J, Severi G, Leongamornlert DA, Tymrakiewicz M, Jhavar S, Saunders E, Hopper JL, Southey MC, Muir KR, English DR, Dearnaley DP, Ardern-Jones AT, Hall AL, O'Brien LT, Wilkinson RA, Sawyer E, Lophatananon A; UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology; UK Prostate testing for cancer and Treatment study (ProtecT Study) Collaborators, Horwich A, Huddart RA, Khoo VS, Parker CC, Woodhouse CJ, Thompson A, Christmas T, Ogden C, Cooper C, Donovan JL, Hamdy FC, Neal DE, Eeles RA, Easton DF.

Nat Genet. 2009 Oct;41(10):1058-60. doi: 10.1038/ng.452. Epub 2009 Sep 20.

PMID:
19767752
[PubMed - indexed for MEDLINE]
14.

Identification of chromosomal aberrations associated with disease progression and a novel 3q13.31 deletion involving LSAMP gene in osteosarcoma.

Yen CC, Chen WM, Chen TH, Chen WY, Chen PC, Chiou HJ, Hung GY, Wu HT, Wei CJ, Shiau CY, Wu YC, Chao TC, Tzeng CH, Chen PM, Lin CH, Chen YJ, Fletcher JA.

Int J Oncol. 2009 Oct;35(4):775-88.

PMID:
19724913
[PubMed - indexed for MEDLINE]
15.

Genetic variation in the prostate stem cell antigen gene PSCA confers susceptibility to urinary bladder cancer.

Wu X, Ye Y, Kiemeney LA, Sulem P, Rafnar T, Matullo G, Seminara D, Yoshida T, Saeki N, Andrew AS, Dinney CP, Czerniak B, Zhang ZF, Kiltie AE, Bishop DT, Vineis P, Porru S, Buntinx F, Kellen E, Zeegers MP, Kumar R, Rudnai P, Gurzau E, Koppova K, Mayordomo JI, Sanchez M, Saez B, Lindblom A, de Verdier P, Steineck G, Mills GB, Schned A, Guarrera S, Polidoro S, Chang SC, Lin J, Chang DW, Hale KS, Majewski T, Grossman HB, Thorlacius S, Thorsteinsdottir U, Aben KK, Witjes JA, Stefansson K, Amos CI, Karagas MR, Gu J.

Nat Genet. 2009 Sep;41(9):991-5. doi: 10.1038/ng.421. Epub 2009 Aug 2. Erratum in: Nat Genet. 2009 Oct;41(10):1156. Guarrera, Simonetta [added]; Polidoro, Silvia [added].

PMID:
19648920
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Association of prostate stem cell antigen gene polymorphisms with the risk of stomach cancer in Japanese.

Matsuo K, Tajima K, Suzuki T, Kawase T, Watanabe M, Shitara K, Misawa K, Ito S, Sawaki A, Muro K, Nakamura T, Yamao K, Yamamura Y, Hamajima N, Hiraki A, Tanaka H.

Int J Cancer. 2009 Oct 15;125(8):1961-4. doi: 10.1002/ijc.24519.

PMID:
19582881
[PubMed - indexed for MEDLINE]
17.

Haplotype-sharing analysis showing Uyghurs are unlikely genetic donors.

Xu S, Jin W, Jin L.

Mol Biol Evol. 2009 Oct;26(10):2197-206. doi: 10.1093/molbev/msp130. Epub 2009 Jun 29.

PMID:
19564211
[PubMed - indexed for MEDLINE]
Free Article
18.

Sensitive detection of chromosomal segments of distinct ancestry in admixed populations.

Price AL, Tandon A, Patterson N, Barnes KC, Rafaels N, Ruczinski I, Beaty TH, Mathias R, Reich D, Myers S.

PLoS Genet. 2009 Jun;5(6):e1000519. doi: 10.1371/journal.pgen.1000519. Epub 2009 Jun 19.

PMID:
19543370
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

LSAMP, a novel candidate tumor suppressor gene in human osteosarcomas, identified by array comparative genomic hybridization.

Kresse SH, Ohnstad HO, Paulsen EB, Bjerkehagen B, Szuhai K, Serra M, Schaefer KL, Myklebost O, Meza-Zepeda LA.

Genes Chromosomes Cancer. 2009 Aug;48(8):679-93. doi: 10.1002/gcc.20675.

PMID:
19441093
[PubMed - indexed for MEDLINE]
20.

Constructing genomic maps of positive selection in humans: where do we go from here?

Akey JM.

Genome Res. 2009 May;19(5):711-22. doi: 10.1101/gr.086652.108.

PMID:
19411596
[PubMed - indexed for MEDLINE]
Free PMC Article

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