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Items: 1 to 20 of 53

1.

Molecular dynamics simulations of Arp2/3 complex activation.

Dalhaimer P, Pollard TD.

Biophys J. 2010 Oct 20;99(8):2568-76. doi: 10.1016/j.bpj.2010.08.027.

2.

An actin-filament-binding interface on the Arp2/3 complex is critical for nucleation and branch stability.

Goley ED, Rammohan A, Znameroski EA, Firat-Karalar EN, Sept D, Welch MD.

Proc Natl Acad Sci U S A. 2010 May 4;107(18):8159-64. doi: 10.1073/pnas.0911668107. Epub 2010 Apr 19.

3.

Computational studies of protein regulation by post-translational phosphorylation.

Narayanan A, Jacobson MP.

Curr Opin Struct Biol. 2009 Apr;19(2):156-63. doi: 10.1016/j.sbi.2009.02.007. Epub 2009 Apr 1. Review.

PMID:
19339172
4.

Molecular dynamics simulation and coarse-grained analysis of the Arp2/3 complex.

Pfaendtner J, Voth GA.

Biophys J. 2008 Dec;95(11):5324-33. doi: 10.1529/biophysj.108.143313. Epub 2008 Sep 19.

5.

Phosphorylation of the Arp2/3 complex is necessary to nucleate actin filaments.

LeClaire LL 3rd, Baumgartner M, Iwasa JH, Mullins RD, Barber DL.

J Cell Biol. 2008 Aug 25;182(4):647-54. doi: 10.1083/jcb.200802145.

6.

The structural basis of actin filament branching by the Arp2/3 complex.

Rouiller I, Xu XP, Amann KJ, Egile C, Nickell S, Nicastro D, Li R, Pollard TD, Volkmann N, Hanein D.

J Cell Biol. 2008 Mar 10;180(5):887-95. doi: 10.1083/jcb.200709092. Epub 2008 Mar 3.

7.

Nucleotide-mediated conformational changes of monomeric actin and Arp3 studied by molecular dynamics simulations.

Dalhaimer P, Pollard TD, Nolen BJ.

J Mol Biol. 2008 Feb 8;376(1):166-83. Epub 2007 Nov 28.

8.

A proposed signaling motif for nuclear import in mRNA processing via the formation of arginine claw.

Hamelberg D, Shen T, McCammon JA.

Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14947-51. Epub 2007 Sep 6.

9.

The activation and inhibition of cyclin-dependent kinase-5 by phosphorylation.

Zhang B, Tan VB, Lim KM, Tay TE.

Biochemistry. 2007 Sep 25;46(38):10841-51. Epub 2007 Aug 22.

PMID:
17713927
10.
11.

Regulation of actin filament assembly by Arp2/3 complex and formins.

Pollard TD.

Annu Rev Biophys Biomol Struct. 2007;36:451-77. Review.

PMID:
17477841
12.

Anatomy of a structural pathway for activation of the catalytic domain of Src kinase Hck.

Banavali NK, Roux B.

Proteins. 2007 Jun 1;67(4):1096-112.

PMID:
17380483
13.

Strengths of hydrogen bonds involving phosphorylated amino acid side chains.

Mandell DJ, Chorny I, Groban ES, Wong SE, Levine E, Rapp CS, Jacobson MP.

J Am Chem Soc. 2007 Jan 31;129(4):820-7.

PMID:
17243818
14.

Structural changes in the cytoplasmic domain of phospholamban by phosphorylation at Ser16: a molecular dynamics study.

Sugita Y, Miyashita N, Yoda T, Ikeguchi M, Toyoshima C.

Biochemistry. 2006 Oct 3;45(39):11752-61.

PMID:
17002276
15.

The ARP2/3 complex: an actin nucleator comes of age.

Goley ED, Welch MD.

Nat Rev Mol Cell Biol. 2006 Oct;7(10):713-26. Review.

PMID:
16990851
16.

Bio3d: an R package for the comparative analysis of protein structures.

Grant BJ, Rodrigues AP, ElSawy KM, McCammon JA, Caves LS.

Bioinformatics. 2006 Nov 1;22(21):2695-6. Epub 2006 Aug 29.

17.

Conformational changes in protein loops and helices induced by post-translational phosphorylation.

Groban ES, Narayanan A, Jacobson MP.

PLoS Comput Biol. 2006 Apr;2(4):e32. Epub 2006 Apr 21.

18.
19.

Molecular details of formin-mediated actin assembly.

Kovar DR.

Curr Opin Cell Biol. 2006 Feb;18(1):11-7. Epub 2005 Dec 20. Review.

PMID:
16364624
20.

Protein complexes regulating Arp2/3-mediated actin assembly.

Stradal TE, Scita G.

Curr Opin Cell Biol. 2006 Feb;18(1):4-10. Epub 2005 Dec 15. Review.

PMID:
16343889
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