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Items: 1 to 20 of 78

1.

Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.

Letessier A, Millot GA, Koundrioukoff S, Lachagès AM, Vogt N, Hansen RS, Malfoy B, Brison O, Debatisse M.

Nature. 2011 Feb 3;470(7332):120-3. doi: 10.1038/nature09745. Epub 2011 Jan 23.

PMID:
21258320
2.

Comparison of constitutional and replication stress-induced genome structural variation by SNP array and mate-pair sequencing.

Arlt MF, Ozdemir AC, Birkeland SR, Lyons RH Jr, Glover TW, Wilson TE.

Genetics. 2011 Mar;187(3):675-83. doi: 10.1534/genetics.110.124776. Epub 2011 Jan 6.

3.

Chromatin signatures of the Drosophila replication program.

Eaton ML, Prinz JA, MacAlpine HK, Tretyakov G, Kharchenko PV, MacAlpine DM.

Genome Res. 2011 Feb;21(2):164-74. doi: 10.1101/gr.116038.110. Epub 2010 Dec 22.

4.

Identification of copy number variation hotspots in human populations.

Fu W, Zhang F, Wang Y, Gu X, Jin L.

Am J Hum Genet. 2010 Oct 8;87(4):494-504. doi: 10.1016/j.ajhg.2010.09.006.

5.

Origins, evolution, and phenotypic impact of new genes.

Kaessmann H.

Genome Res. 2010 Oct;20(10):1313-26. doi: 10.1101/gr.101386.109. Epub 2010 Jul 22. Review.

6.

Gene copy-number polymorphism in nature.

Schrider DR, Hahn MW.

Proc Biol Sci. 2010 Nov 7;277(1698):3213-21. doi: 10.1098/rspb.2010.1180. Epub 2010 Jun 30. Review.

7.

Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus.

Schmidt JM, Good RT, Appleton B, Sherrard J, Raymant GC, Bogwitz MR, Martin J, Daborn PJ, Goddard ME, Batterham P, Robin C.

PLoS Genet. 2010 Jun 24;6(6):e1000998. doi: 10.1371/journal.pgen.1000998.

8.

Genomic rearrangements in inherited disease and cancer.

Chen JM, Cooper DN, Férec C, Kehrer-Sawatzki H, Patrinos GP.

Semin Cancer Biol. 2010 Aug;20(4):222-33. doi: 10.1016/j.semcancer.2010.05.007. Epub 2010 Jun 9. Review.

PMID:
20541013
9.

Mutational bias shaping fly copy number variation: implications for genome evolution.

Cardoso-Moreira MM, Long M.

Trends Genet. 2010 Jun;26(6):243-7. doi: 10.1016/j.tig.2010.03.002. Epub 2010 Apr 21.

10.
11.

Signatures of mutation and selection in the cancer genome.

Bignell GR, Greenman CD, Davies H, Butler AP, Edkins S, Andrews JM, Buck G, Chen L, Beare D, Latimer C, Widaa S, Hinton J, Fahey C, Fu B, Swamy S, Dalgliesh GL, Teh BT, Deloukas P, Yang F, Campbell PJ, Futreal PA, Stratton MR.

Nature. 2010 Feb 18;463(7283):893-8. doi: 10.1038/nature08768.

12.

BEDTools: a flexible suite of utilities for comparing genomic features.

Quinlan AR, Hall IM.

Bioinformatics. 2010 Mar 15;26(6):841-2. doi: 10.1093/bioinformatics/btq033. Epub 2010 Jan 28.

13.

The evolution of gene duplications: classifying and distinguishing between models.

Innan H, Kondrashov F.

Nat Rev Genet. 2010 Feb;11(2):97-108. doi: 10.1038/nrg2689. Epub 2010 Jan 6. Review.

PMID:
20051986
14.

Origins and functional impact of copy number variation in the human genome.

Conrad DF, Pinto D, Redon R, Feuk L, Gokcumen O, Zhang Y, Aerts J, Andrews TD, Barnes C, Campbell P, Fitzgerald T, Hu M, Ihm CH, Kristiansson K, Macarthur DG, Macdonald JR, Onyiah I, Pang AW, Robson S, Stirrups K, Valsesia A, Walter K, Wei J; Wellcome Trust Case Control Consortium, Tyler-Smith C, Carter NP, Lee C, Scherer SW, Hurles ME.

Nature. 2010 Apr 1;464(7289):704-12. doi: 10.1038/nature08516. Epub 2009 Oct 7.

15.

An expressed fgf4 retrogene is associated with breed-defining chondrodysplasia in domestic dogs.

Parker HG, VonHoldt BM, Quignon P, Margulies EH, Shao S, Mosher DS, Spady TC, Elkahloun A, Cargill M, Jones PG, Maslen CL, Acland GM, Sutter NB, Kuroki K, Bustamante CD, Wayne RK, Ostrander EA.

Science. 2009 Aug 21;325(5943):995-8. doi: 10.1126/science.1173275. Epub 2009 Jul 16.

16.

Mechanisms of change in gene copy number.

Hastings PJ, Lupski JR, Rosenberg SM, Ira G.

Nat Rev Genet. 2009 Aug;10(8):551-64. doi: 10.1038/nrg2593. Review.

17.

Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens.

Wright D, Boije H, Meadows JR, Bed'hom B, Gourichon D, Vieaud A, Tixier-Boichard M, Rubin CJ, Imsland F, Hallböök F, Andersson L.

PLoS Genet. 2009 Jun;5(6):e1000512. doi: 10.1371/journal.pgen.1000512. Epub 2009 Jun 12.

18.

Pervasive natural selection in the Drosophila genome?

Sella G, Petrov DA, Przeworski M, Andolfatto P.

PLoS Genet. 2009 Jun;5(6):e1000495. doi: 10.1371/journal.pgen.1000495. Epub 2009 Jun 5.

19.

Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome.

Schwaiger M, Stadler MB, Bell O, Kohler H, Oakeley EJ, Schübeler D.

Genes Dev. 2009 Mar 1;23(5):589-601. doi: 10.1101/gad.511809.

20.

Population genetic models of duplicated genes.

Innan H.

Genetica. 2009 Sep;137(1):19-37. doi: 10.1007/s10709-009-9355-1. Epub 2009 Mar 6. Review.

PMID:
19266289
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