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Results: 1 to 20 of 58

References for PMC Articles for PubMed (Select 22025678)

1.

TFEB links autophagy to lysosomal biogenesis.

Settembre C, Di Malta C, Polito VA, Garcia Arencibia M, Vetrini F, Erdin S, Erdin SU, Huynh T, Medina D, Colella P, Sardiello M, Rubinsztein DC, Ballabio A.

Science. 2011 Jun 17;332(6036):1429-33. doi: 10.1126/science.1204592. Epub 2011 May 26.

2.

Relocalizing genetic loci into specific subnuclear neighborhoods.

Lee HY, Johnson KD, Boyer ME, Bresnick EH.

J Biol Chem. 2011 May 27;286(21):18834-44. doi: 10.1074/jbc.M111.221481. Epub 2011 Mar 11.

3.

Global gene expression analysis of human erythroid progenitors.

Merryweather-Clarke AT, Atzberger A, Soneji S, Gray N, Clark K, Waugh C, McGowan SJ, Taylor S, Nandi AK, Wood WG, Roberts DJ, Higgs DR, Buckle VJ, Robson KJ.

Blood. 2011 Mar 31;117(13):e96-108. doi: 10.1182/blood-2010-07-290825. Epub 2011 Jan 26. Erratum in: Blood. 2011 Dec 22;118(26):6993.

4.

Autophagy in immunity and inflammation.

Levine B, Mizushima N, Virgin HW.

Nature. 2011 Jan 20;469(7330):323-35. doi: 10.1038/nature09782. Review.

5.

Autophagy and metabolism.

Rabinowitz JD, White E.

Science. 2010 Dec 3;330(6009):1344-8. doi: 10.1126/science.1193497. Review.

6.

Autophagy in mammalian development and differentiation.

Mizushima N, Levine B.

Nat Cell Biol. 2010 Sep;12(9):823-30. doi: 10.1038/ncb0910-823. Review.

7.

Using ChIP-seq technology to identify targets of zinc finger transcription factors.

O'Geen H, Frietze S, Farnham PJ.

Methods Mol Biol. 2010;649:437-55. doi: 10.1007/978-1-60761-753-2_27.

8.

miR-451 protects against erythroid oxidant stress by repressing 14-3-3zeta.

Yu D, dos Santos CO, Zhao G, Jiang J, Amigo JD, Khandros E, Dore LC, Yao Y, D'Souza J, Zhang Z, Ghaffari S, Choi J, Friend S, Tong W, Orange JS, Paw BH, Weiss MJ.

Genes Dev. 2010 Aug 1;24(15):1620-33. doi: 10.1101/gad.1942110.

9.

GATA switches as developmental drivers.

Bresnick EH, Lee HY, Fujiwara T, Johnson KD, Keles S.

J Biol Chem. 2010 Oct 8;285(41):31087-93. doi: 10.1074/jbc.R110.159079. Epub 2010 Jul 29. Review.

10.

Network organization of the human autophagy system.

Behrends C, Sowa ME, Gygi SP, Harper JW.

Nature. 2010 Jul 1;466(7302):68-76. doi: 10.1038/nature09204. Epub 2010 Jun 20.

11.

Regulation of autophagy by ATF4 in response to severe hypoxia.

Rzymski T, Milani M, Pike L, Buffa F, Mellor HR, Winchester L, Pires I, Hammond E, Ragoussis I, Harris AL.

Oncogene. 2010 Aug 5;29(31):4424-35. doi: 10.1038/onc.2010.191. Epub 2010 May 31.

PMID:
20514020
12.

LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis.

Weidberg H, Shvets E, Shpilka T, Shimron F, Shinder V, Elazar Z.

EMBO J. 2010 Jun 2;29(11):1792-802. doi: 10.1038/emboj.2010.74. Epub 2010 Apr 23.

13.

Loss of autophagy in erythroid cells leads to defective removal of mitochondria and severe anemia in vivo.

Mortensen M, Ferguson DJ, Edelmann M, Kessler B, Morten KJ, Komatsu M, Simon AK.

Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):832-7. doi: 10.1073/pnas.0913170107. Epub 2009 Dec 22.

14.

Controlling hematopoiesis through sumoylation-dependent regulation of a GATA factor.

Lee HY, Johnson KD, Fujiwara T, Boyer ME, Kim SI, Bresnick EH.

Mol Cell. 2009 Dec 25;36(6):984-95. doi: 10.1016/j.molcel.2009.11.005.

15.

Autophagy regulation by p53.

Maiuri MC, Galluzzi L, Morselli E, Kepp O, Malik SA, Kroemer G.

Curr Opin Cell Biol. 2010 Apr;22(2):181-5. doi: 10.1016/j.ceb.2009.12.001. Epub 2010 Jan 13. Review.

PMID:
20044243
16.

Insights into GATA-1-mediated gene activation versus repression via genome-wide chromatin occupancy analysis.

Yu M, Riva L, Xie H, Schindler Y, Moran TB, Cheng Y, Yu D, Hardison R, Weiss MJ, Orkin SH, Bernstein BE, Fraenkel E, Cantor AB.

Mol Cell. 2009 Nov 25;36(4):682-95. doi: 10.1016/j.molcel.2009.11.002.

17.

Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy.

Fujiwara T, O'Geen H, Keles S, Blahnik K, Linnemann AK, Kang YA, Choi K, Farnham PJ, Bresnick EH.

Mol Cell. 2009 Nov 25;36(4):667-81. doi: 10.1016/j.molcel.2009.11.001.

18.

Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data.

Blahnik KR, Dou L, O'Geen H, McPhillips T, Xu X, Cao AR, Iyengar S, Nicolet CM, Ludäscher B, Korf I, Farnham PJ.

Nucleic Acids Res. 2010 Jan;38(3):e13. doi: 10.1093/nar/gkp1012. Epub 2009 Nov 11.

19.

Lysosome biogenesis and lysosomal membrane proteins: trafficking meets function.

Saftig P, Klumperman J.

Nat Rev Mol Cell Biol. 2009 Sep;10(9):623-35. doi: 10.1038/nrm2745. Epub 2009 Aug 12. Review.

PMID:
19672277
20.

A gene network regulating lysosomal biogenesis and function.

Sardiello M, Palmieri M, di Ronza A, Medina DL, Valenza M, Gennarino VA, Di Malta C, Donaudy F, Embrione V, Polishchuk RS, Banfi S, Parenti G, Cattaneo E, Ballabio A.

Science. 2009 Jul 24;325(5939):473-7. doi: 10.1126/science.1174447. Epub 2009 Jun 25.

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