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Items: 1 to 20 of 46

1.

Phylogenetic microarrays for cultivation-independent identification and metabolic characterization of microorganisms in complex samples.

Loy A, Pester M, Steger D.

Methods Mol Biol. 2011;688:187-206. doi: 10.1007/978-1-60761-947-5_13.

PMID:
20938840
2.

Physico-chemical modelling of target depletion during hybridization on oligonulceotide microarrays.

Burden CJ, Binder H.

Phys Biol. 2009 Dec 21;7(1):016004. doi: 10.1088/1478-3975/7/1/016004.

PMID:
20026877
3.

Applications of DNA microarray in disease diagnostics.

Yoo SM, Choi JH, Lee SY, Yoo NC.

J Microbiol Biotechnol. 2009 Jul;19(7):635-46. Review.

4.

Isotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge.

Hesselsoe M, Füreder S, Schloter M, Bodrossy L, Iversen N, Roslev P, Nielsen PH, Wagner M, Loy A.

ISME J. 2009 Dec;3(12):1349-64. doi: 10.1038/ismej.2009.78. Epub 2009 Jul 2.

PMID:
19571892
5.

16S rRNA gene-based phylogenetic microarray for simultaneous identification of members of the genus Burkholderia.

Schönmann S, Loy A, Wimmersberger C, Sobek J, Aquino C, Vandamme P, Frey B, Rehrauer H, Eberl L.

Environ Microbiol. 2009 Apr;11(4):779-800.

PMID:
19396938
6.

The effects of mismatches on hybridization in DNA microarrays: determination of nearest neighbor parameters.

Hooyberghs J, Van Hummelen P, Carlon E.

Nucleic Acids Res. 2009 Apr;37(7):e53. doi: 10.1093/nar/gkp109. Epub 2009 Mar 6.

7.

Genotyping of mutation in the beta-globin gene using DNA microarrays.

Dufva M, Poulsen L.

Methods Mol Biol. 2009;509:47-56. doi: 10.1007/978-1-59745-372-1_4.

PMID:
19212714
8.

Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.

Kechris K, Yang YH, Yeh RF.

BMC Genomics. 2008 Nov 20;9:551. doi: 10.1186/1471-2164-9-551.

9.

Mass transfer effects on DNA hybridization in a flow-through microarray.

Mocanu D, Kolesnychenko A, Aarts S, Troost-Dejong A, Pierik A, Vossenaar E, Stapert H.

J Biotechnol. 2009 Jan 15;139(2):179-85. doi: 10.1016/j.jbiotec.2008.10.001. Epub 2008 Oct 15.

PMID:
18984014
10.

An integrated reaction-transport model for DNA surface hybridization: implications for DNA microarrays.

Singh R, Nitsche J, Andreadis ST.

Ann Biomed Eng. 2009 Jan;37(1):255-69. doi: 10.1007/s10439-008-9584-y. Epub 2008 Oct 22.

PMID:
18941894
11.

Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes.

Sachse K, Laroucau K, Hotzel H, Schubert E, Ehricht R, Slickers P.

BMC Microbiol. 2008 Apr 17;8:63. doi: 10.1186/1471-2180-8-63.

12.

DNA surface hybridization regimes.

Gong P, Levicky R.

Proc Natl Acad Sci U S A. 2008 Apr 8;105(14):5301-6. doi: 10.1073/pnas.0709416105. Epub 2008 Apr 1.

13.

An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.

Ono N, Suzuki S, Furusawa C, Agata T, Kashiwagi A, Shimizu H, Yomo T.

Bioinformatics. 2008 May 15;24(10):1278-85. doi: 10.1093/bioinformatics/btn109. Epub 2008 Mar 31.

14.

DNA multiplex hybridization on microarrays and thermodynamic stability in solution: a direct comparison.

Fish DJ, Horne MT, Brewood GP, Goodarzi JP, Alemayehu S, Bhandiwad A, Searles RP, Benight AS.

Nucleic Acids Res. 2007;35(21):7197-208. Epub 2007 Oct 18.

15.
16.

Array feature size influences nucleic acid surface capture in DNA microarrays.

Dandy DS, Wu P, Grainger DW.

Proc Natl Acad Sci U S A. 2007 May 15;104(20):8223-8. Epub 2007 May 7.

17.

Unravelling microbial communities with DNA-microarrays: challenges and future directions.

Wagner M, Smidt H, Loy A, Zhou J.

Microb Ecol. 2007 Apr;53(3):498-506. Epub 2007 Mar 8. Review.

PMID:
17345135
18.

The Stanford Microarray Database: implementation of new analysis tools and open source release of software.

Demeter J, Beauheim C, Gollub J, Hernandez-Boussard T, Jin H, Maier D, Matese JC, Nitzberg M, Wymore F, Zachariah ZK, Brown PO, Sherlock G, Ball CA.

Nucleic Acids Res. 2007 Jan;35(Database issue):D766-70. Epub 2006 Dec 20.

19.

High-resolution spatial normalization for microarrays containing embedded technical replicates.

Yuan DS, Irizarry RA.

Bioinformatics. 2006 Dec 15;22(24):3054-60. Epub 2006 Oct 23.

20.

Highly parallel microbial diagnostics using oligonucleotide microarrays.

Loy A, Bodrossy L.

Clin Chim Acta. 2006 Jan;363(1-2):106-19. Epub 2005 Aug 26. Review.

PMID:
16126187
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