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Results: 1 to 20 of 187

References for PMC Articles for PubMed (Select 21850042)

1.

LINE-1 elements in structural variation and disease.

Beck CR, Garcia-Perez JL, Badge RM, Moran JV.

Annu Rev Genomics Hum Genet. 2011;12:187-215. doi: 10.1146/annurev-genom-082509-141802. Review.

2.

Retrotransposition of marked SVA elements by human L1s in cultured cells.

Hancks DC, Goodier JL, Mandal PK, Cheung LE, Kazazian HH Jr.

Hum Mol Genet. 2011 Sep 1;20(17):3386-400. doi: 10.1093/hmg/ddr245. Epub 2011 Jun 2.

3.

The Drosophila gene disruption project: progress using transposons with distinctive site specificities.

Bellen HJ, Levis RW, He Y, Carlson JW, Evans-Holm M, Bae E, Kim J, Metaxakis A, Savakis C, Schulze KL, Hoskins RA, Spradling AC.

Genetics. 2011 Jul;188(3):731-43. doi: 10.1534/genetics.111.126995. Epub 2011 Apr 21.

4.

The GENCODE exome: sequencing the complete human exome.

Coffey AJ, Kokocinski F, Calafato MS, Scott CE, Palta P, Drury E, Joyce CJ, Leproust EM, Harrow J, Hunt S, Lehesjoki AE, Turner DJ, Hubbard TJ, Palotie A.

Eur J Hum Genet. 2011 Jul;19(7):827-31. doi: 10.1038/ejhg.2011.28. Epub 2011 Mar 2.

5.

Mapping copy number variation by population-scale genome sequencing.

Mills RE, Walter K, Stewart C, Handsaker RE, Chen K, Alkan C, Abyzov A, Yoon SC, Ye K, Cheetham RK, Chinwalla A, Conrad DF, Fu Y, Grubert F, Hajirasouliha I, Hormozdiari F, Iakoucheva LM, Iqbal Z, Kang S, Kidd JM, Konkel MK, Korn J, Khurana E, Kural D, Lam HY, Leng J, Li R, Li Y, Lin CY, Luo R, Mu XJ, Nemesh J, Peckham HE, Rausch T, Scally A, Shi X, Stromberg MP, Stütz AM, Urban AE, Walker JA, Wu J, Zhang Y, Zhang ZD, Batzer MA, Ding L, Marth GT, McVean G, Sebat J, Snyder M, Wang J, Ye K, Eichler EE, Gerstein MB, Hurles ME, Lee C, McCarroll SA, Korbel JO; 1000 Genomes Project.

Nature. 2011 Feb 3;470(7332):59-65. doi: 10.1038/nature09708.

6.

Alu repeat discovery and characterization within human genomes.

Hormozdiari F, Alkan C, Ventura M, Hajirasouliha I, Malig M, Hach F, Yorukoglu D, Dao P, Bakhshi M, Sahinalp SC, Eichler EE.

Genome Res. 2011 Jun;21(6):840-9. doi: 10.1101/gr.115956.110. Epub 2010 Dec 3.

7.

Small RNA sorting: matchmaking for Argonautes.

Czech B, Hannon GJ.

Nat Rev Genet. 2011 Jan;12(1):19-31. doi: 10.1038/nrg2916. Epub 2010 Nov 30. Review.

8.

A human genome structural variation sequencing resource reveals insights into mutational mechanisms.

Kidd JM, Graves T, Newman TL, Fulton R, Hayden HS, Malig M, Kallicki J, Kaul R, Wilson RK, Eichler EE.

Cell. 2010 Nov 24;143(5):837-47. doi: 10.1016/j.cell.2010.10.027.

9.

Evolution of diverse mechanisms for protecting chromosome ends by Drosophila TART telomere retrotransposons.

George JA, Traverse KL, DeBaryshe PG, Kelley KJ, Pardue ML.

Proc Natl Acad Sci U S A. 2010 Dec 7;107(49):21052-7. doi: 10.1073/pnas.1015926107. Epub 2010 Nov 18.

10.

L1 retrotransposition in neurons is modulated by MeCP2.

Muotri AR, Marchetto MC, Coufal NG, Oefner R, Yeo G, Nakashima K, Gage FH.

Nature. 2010 Nov 18;468(7322):443-6. doi: 10.1038/nature09544.

11.

Epigenetic control of retrotransposon expression in human embryonic stem cells.

Macia A, Muñoz-Lopez M, Cortes JL, Hastings RK, Morell S, Lucena-Aguilar G, Marchal JA, Badge RM, Garcia-Perez JL.

Mol Cell Biol. 2011 Jan;31(2):300-16. doi: 10.1128/MCB.00561-10. Epub 2010 Nov 1.

12.

A map of human genome variation from population-scale sequencing.

1000 Genomes Project Consortium, Abecasis GR, Altshuler D, Auton A, Brooks LD, Durbin RM, Gibbs RA, Hurles ME, McVean GA.

Nature. 2010 Oct 28;467(7319):1061-73. doi: 10.1038/nature09534. Erratum in: Nature. 2011 May 26;473(7348):544. Xue, Yali [added]; Cartwright, Reed A [added]; Altshuler, David L [corrected to Altshuler, David]; Kebbel, Andrew [corrected to Keebler, Jonathan]; Koko-Gonzales, Paula [corrected to Kokko-Gonzales, Paula]; Nickerson, Debbie A [corrected to Nickerson, Deborah A].

13.

Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans.

Ewing AD, Kazazian HH Jr.

Genome Res. 2011 Jun;21(6):985-90. doi: 10.1101/gr.114777.110. Epub 2010 Oct 27.

14.

Determinants that specify the integration pattern of retrotransposon Tf1 in the fbp1 promoter of Schizosaccharomyces pombe.

Majumdar A, Chatterjee AG, Ripmaster TL, Levin HL.

J Virol. 2011 Jan;85(1):519-29. doi: 10.1128/JVI.01719-10. Epub 2010 Oct 27.

15.

Somatic piRNA biogenesis.

Zamore PD.

EMBO J. 2010 Oct 6;29(19):3219-21. doi: 10.1038/emboj.2010.232. No abstract available.

16.

An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila.

Olivieri D, Sykora MM, Sachidanandam R, Mechtler K, Brennecke J.

EMBO J. 2010 Oct 6;29(19):3301-17. doi: 10.1038/emboj.2010.212. Epub 2010 Sep 3.

17.

Neuronal DNA content variation (DCV) with regional and individual differences in the human brain.

Westra JW, Rivera RR, Bushman DM, Yung YC, Peterson SE, Barral S, Chun J.

J Comp Neurol. 2010 Oct 1;518(19):3981-4000. doi: 10.1002/cne.22436.

18.

Epigenetic silencing of engineered L1 retrotransposition events in human embryonic carcinoma cells.

Garcia-Perez JL, Morell M, Scheys JO, Kulpa DA, Morell S, Carter CC, Hammer GD, Collins KL, O'Shea KS, Menendez P, Moran JV.

Nature. 2010 Aug 5;466(7307):769-73. doi: 10.1038/nature09209.

19.

Natural mutagenesis of human genomes by endogenous retrotransposons.

Iskow RC, McCabe MT, Mills RE, Torene S, Pittard WS, Neuwald AF, Van Meir EG, Vertino PM, Devine SE.

Cell. 2010 Jun 25;141(7):1253-61. doi: 10.1016/j.cell.2010.05.020.

20.

Mobile interspersed repeats are major structural variants in the human genome.

Huang CR, Schneider AM, Lu Y, Niranjan T, Shen P, Robinson MA, Steranka JP, Valle D, Civin CI, Wang T, Wheelan SJ, Ji H, Boeke JD, Burns KH.

Cell. 2010 Jun 25;141(7):1171-82. doi: 10.1016/j.cell.2010.05.026.

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