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Results: 1 to 20 of 60

1.

Reduction in ribosomal protein synthesis is sufficient to explain major effects on ribosome production after short-term TOR inactivation in Saccharomyces cerevisiae.

Reiter A, Steinbauer R, Philippi A, Gerber J, Tschochner H, Milkereit P, Griesenbeck J.

Mol Cell Biol. 2011 Feb;31(4):803-17. doi: 10.1128/MCB.01227-10. Epub 2010 Dec 13.

PMID:
21149576
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Antagonistic interactions between the cAMP-dependent protein kinase and Tor signaling pathways modulate cell growth in Saccharomyces cerevisiae.

Ramachandran V, Herman PK.

Genetics. 2011 Feb;187(2):441-54. doi: 10.1534/genetics.110.123372. Epub 2010 Nov 15.

PMID:
21078689
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The rapamycin-sensitive phosphoproteome reveals that TOR controls protein kinase A toward some but not all substrates.

Soulard A, Cremonesi A, Moes S, Schütz F, Jenö P, Hall MN.

Mol Biol Cell. 2010 Oct 1;21(19):3475-86. doi: 10.1091/mbc.E10-03-0182. Epub 2010 Aug 11.

PMID:
20702584
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A global protein kinase and phosphatase interaction network in yeast.

Breitkreutz A, Choi H, Sharom JR, Boucher L, Neduva V, Larsen B, Lin ZY, Breitkreutz BJ, Stark C, Liu G, Ahn J, Dewar-Darch D, Reguly T, Tang X, Almeida R, Qin ZS, Pawson T, Gingras AC, Nesvizhskii AI, Tyers M.

Science. 2010 May 21;328(5981):1043-6. doi: 10.1126/science.1176495.

PMID:
20489023
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

PhosphoGRID: a database of experimentally verified in vivo protein phosphorylation sites from the budding yeast Saccharomyces cerevisiae.

Stark C, Su TC, Breitkreutz A, Lourenco P, Dahabieh M, Breitkreutz BJ, Tyers M, Sadowski I.

Database (Oxford). 2010;2010:bap026. doi: 10.1093/database/bap026. Epub 2010 Jan 28.

PMID:
20428315
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

TOR-dependent reduction in the expression level of Rrn3p lowers the activity of the yeast RNA Pol I machinery, but does not account for the strong inhibition of rRNA production.

Philippi A, Steinbauer R, Reiter A, Fath S, Leger-Silvestre I, Milkereit P, Griesenbeck J, Tschochner H.

Nucleic Acids Res. 2010 Sep;38(16):5315-26. doi: 10.1093/nar/gkq264. Epub 2010 Apr 25.

PMID:
20421203
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Stb3 plays a role in the glucose-induced transition from quiescence to growth in Saccharomyces cerevisiae.

Liko D, Conway MK, Grunwald DS, Heideman W.

Genetics. 2010 Jul;185(3):797-810. doi: 10.1534/genetics.110.116665. Epub 2010 Apr 12.

PMID:
20385783
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

Pöll G, Braun T, Jakovljevic J, Neueder A, Jakob S, Woolford JL Jr, Tschochner H, Milkereit P.

PLoS One. 2009 Dec 11;4(12):e8249. doi: 10.1371/journal.pone.0008249.

PMID:
20011513
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Protein kinase A and TORC1 activate genes for ribosomal biogenesis by inactivating repressors encoded by Dot6 and its homolog Tod6.

Lippman SI, Broach JR.

Proc Natl Acad Sci U S A. 2009 Nov 24;106(47):19928-33. doi: 10.1073/pnas.0907027106. Epub 2009 Nov 9.

PMID:
19901341
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Sch9 partially mediates TORC1 signaling to control ribosomal RNA synthesis.

Wei Y, Zheng XF.

Cell Cycle. 2009 Dec 15;8(24):4085-90. Epub 2009 Dec 25.

PMID:
19823048
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Growth control and ribosome biogenesis.

Lempiäinen H, Shore D.

Curr Opin Cell Biol. 2009 Dec;21(6):855-63. doi: 10.1016/j.ceb.2009.09.002. Epub 2009 Sep 30. Review. Erratum in: Curr Opin Cell Biol. 2010 Aug;22(4):555.

PMID:
19796927
[PubMed - indexed for MEDLINE]
12.

A Rab escort protein integrates the secretion system with TOR signaling and ribosome biogenesis.

Singh J, Tyers M.

Genes Dev. 2009 Aug 15;23(16):1944-58. doi: 10.1101/gad.1804409.

PMID:
19684114
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis.

Huber A, Bodenmiller B, Uotila A, Stahl M, Wanka S, Gerrits B, Aebersold R, Loewith R.

Genes Dev. 2009 Aug 15;23(16):1929-43. doi: 10.1101/gad.532109.

PMID:
19684113
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microarray profiling of phage-display selections for rapid mapping of transcription factor-DNA interactions.

Freckleton G, Lippman SI, Broach JR, Tavazoie S.

PLoS Genet. 2009 Apr;5(4):e1000449. doi: 10.1371/journal.pgen.1000449. Epub 2009 Apr 10.

PMID:
19360118
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Sfp1 interaction with TORC1 and Mrs6 reveals feedback regulation on TOR signaling.

Lempiäinen H, Uotila A, Urban J, Dohnal I, Ammerer G, Loewith R, Shore D.

Mol Cell. 2009 Mar 27;33(6):704-16. doi: 10.1016/j.molcel.2009.01.034.

PMID:
19328065
[PubMed - indexed for MEDLINE]
Free Article
16.

Regulation of RNA polymerase III transcription involves SCH9-dependent and SCH9-independent branches of the target of rapamycin (TOR) pathway.

Lee J, Moir RD, Willis IM.

J Biol Chem. 2009 May 8;284(19):12604-8. doi: 10.1074/jbc.C900020200. Epub 2009 Mar 19.

PMID:
19299514
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead B, Trapnell C, Pop M, Salzberg SL.

Genome Biol. 2009;10(3):R25. doi: 10.1186/gb-2009-10-3-r25. Epub 2009 Mar 4.

PMID:
19261174
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

High-resolution DNA-binding specificity analysis of yeast transcription factors.

Zhu C, Byers KJ, McCord RP, Shi Z, Berger MF, Newburger DE, Saulrieta K, Smith Z, Shah MV, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A, Murthy T, Labaer J, Bulyk ML.

Genome Res. 2009 Apr;19(4):556-66. doi: 10.1101/gr.090233.108. Epub 2009 Jan 21.

PMID:
19158363
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters.

Badis G, Chan ET, van Bakel H, Pena-Castillo L, Tillo D, Tsui K, Carlson CD, Gossett AJ, Hasinoff MJ, Warren CL, Gebbia M, Talukder S, Yang A, Mnaimneh S, Terterov D, Coburn D, Li Yeo A, Yeo ZX, Clarke ND, Lieb JD, Ansari AZ, Nislow C, Hughes TR.

Mol Cell. 2008 Dec 26;32(6):878-87. doi: 10.1016/j.molcel.2008.11.020.

PMID:
19111667
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

PhosphoPep--a database of protein phosphorylation sites in model organisms.

Bodenmiller B, Campbell D, Gerrits B, Lam H, Jovanovic M, Picotti P, Schlapbach R, Aebersold R.

Nat Biotechnol. 2008 Dec;26(12):1339-40. doi: 10.1038/nbt1208-1339. No abstract available.

PMID:
19060867
[PubMed - indexed for MEDLINE]
Free PMC Article

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