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Results: 1 to 20 of 23

References for PMC Articles for PubMed (Select 21543516)

1.

Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis.

Tang F, Barbacioru C, Bao S, Lee C, Nordman E, Wang X, Lao K, Surani MA.

Cell Stem Cell. 2010 May 7;6(5):468-78. doi: 10.1016/j.stem.2010.03.015.

2.

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P.

Dev Cell. 2010 Apr 20;18(4):675-85. doi: 10.1016/j.devcel.2010.02.012.

3.

Direct RNA sequencing.

Ozsolak F, Platt AR, Jones DR, Reifenberger JG, Sass LE, McInerney P, Thompson JF, Bowers J, Jarosz M, Milos PM.

Nature. 2009 Oct 8;461(7265):814-8. doi: 10.1038/nature08390. Epub 2009 Sep 23.

PMID:
19776739
4.

The cyclic gene Hes1 contributes to diverse differentiation responses of embryonic stem cells.

Kobayashi T, Mizuno H, Imayoshi I, Furusawa C, Shirahige K, Kageyama R.

Genes Dev. 2009 Aug 15;23(16):1870-5. doi: 10.1101/gad.1823109.

5.

Quantitative analysis of gene expression in a single cell by qPCR.

Taniguchi K, Kajiyama T, Kambara H.

Nat Methods. 2009 Jul;6(7):503-6. doi: 10.1038/nmeth.1338. Epub 2009 Jun 14.

PMID:
19525960
6.

mRNA-Seq whole-transcriptome analysis of a single cell.

Tang F, Barbacioru C, Wang Y, Nordman E, Lee C, Xu N, Wang X, Bodeau J, Tuch BB, Siddiqui A, Lao K, Surani MA.

Nat Methods. 2009 May;6(5):377-82. doi: 10.1038/nmeth.1315. Epub 2009 Apr 6.

PMID:
19349980
7.

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead B, Trapnell C, Pop M, Salzberg SL.

Genome Biol. 2009;10(3):R25. doi: 10.1186/gb-2009-10-3-r25. Epub 2009 Mar 4.

8.

Novel application of Phi29 DNA polymerase: RNA detection and analysis in vitro and in situ by target RNA-primed RCA.

Lagunavicius A, Merkiene E, Kiveryte Z, Savaneviciute A, Zimbaite-Ruskuliene V, Radzvilavicius T, Janulaitis A.

RNA. 2009 May;15(5):765-71. doi: 10.1261/rna.1279909. Epub 2009 Feb 25.

9.

Alternative isoform regulation in human tissue transcriptomes.

Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, Mayr C, Kingsmore SF, Schroth GP, Burge CB.

Nature. 2008 Nov 27;456(7221):470-6. doi: 10.1038/nature07509.

10.

Transcripts synthesized by RNA polymerase III can be polyadenylated in an AAUAAA-dependent manner.

Borodulina OR, Kramerov DA.

RNA. 2008 Sep;14(9):1865-73. doi: 10.1261/rna.1006608. Epub 2008 Jul 24.

11.

Stem cell transcriptome profiling via massive-scale mRNA sequencing.

Cloonan N, Forrest AR, Kolle G, Gardiner BB, Faulkner GJ, Brown MK, Taylor DF, Steptoe AL, Wani S, Bethel G, Robertson AJ, Perkins AC, Bruce SJ, Lee CC, Ranade SS, Peckham HE, Manning JM, McKernan KJ, Grimmond SM.

Nat Methods. 2008 Jul;5(7):613-9. doi: 10.1038/nmeth.1223. Epub 2008 May 30.

PMID:
18516046
12.

Mapping and quantifying mammalian transcriptomes by RNA-Seq.

Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B.

Nat Methods. 2008 Jul;5(7):621-8. doi: 10.1038/nmeth.1226. Epub 2008 May 30.

PMID:
18516045
13.

Mouse embryonic stem cell-derived spheres with distinct neurogenic potentials.

Moliner A, Enfors P, Ibáñez CF, Andäng M.

Stem Cells Dev. 2008 Apr;17(2):233-43. doi: 10.1089/scd.2007.0211.

PMID:
18447639
14.

Method for single-cell microarray analysis and application to gene-expression profiling of GABAergic neuron progenitors.

Esumi S, Wu SX, Yanagawa Y, Obata K, Sugimoto Y, Tamamaki N.

Neurosci Res. 2008 Apr;60(4):439-51. doi: 10.1016/j.neures.2007.12.011. Epub 2008 Jan 6.

PMID:
18280602
15.

Transcription factor profiling in individual hematopoietic progenitors by digital RT-PCR.

Warren L, Bryder D, Weissman IL, Quake SR.

Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17807-12. Epub 2006 Nov 10.

16.

Stochastic mRNA synthesis in mammalian cells.

Raj A, Peskin CS, Tranchina D, Vargas DY, Tyagi S.

PLoS Biol. 2006 Oct;4(10):e309.

17.

Transcriptional pulsing of a developmental gene.

Chubb JR, Trcek T, Shenoy SM, Singer RH.

Curr Biol. 2006 May 23;16(10):1018-25.

18.

An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis.

Kurimoto K, Yabuta Y, Ohinata Y, Ono Y, Uno KD, Yamada RG, Ueda HR, Saitou M.

Nucleic Acids Res. 2006 Mar 17;34(5):e42. Print 2006.

19.
20.

Human housekeeping genes are compact.

Eisenberg E, Levanon EY.

Trends Genet. 2003 Jul;19(7):362-5. No abstract available.

PMID:
12850439
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