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Items: 1 to 20 of 32

1.

Structure and mechanism of human DNA polymerase eta.

Biertümpfel C, Zhao Y, Kondo Y, Ramón-Maiques S, Gregory M, Lee JY, Masutani C, Lehmann AR, Hanaoka F, Yang W.

Nature. 2010 Jun 24;465(7301):1044-8. doi: 10.1038/nature09196. Erratum in: Nature. 2011 Aug 18;476(7360):360.

2.

Loop 1 modulates the fidelity of DNA polymerase lambda.

Bebenek K, Garcia-Diaz M, Zhou RZ, Povirk LF, Kunkel TA.

Nucleic Acids Res. 2010 Sep;38(16):5419-31. doi: 10.1093/nar/gkq261. Epub 2010 Apr 30.

3.

Conformational transitions in DNA polymerase I revealed by single-molecule FRET.

Santoso Y, Joyce CM, Potapova O, Le Reste L, Hohlbein J, Torella JP, Grindley ND, Kapanidis AN.

Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):715-20. doi: 10.1073/pnas.0910909107. Epub 2009 Dec 18.

4.

Single-molecule measurements of synthesis by DNA polymerase with base-pair resolution.

Christian TD, Romano LJ, Rueda D.

Proc Natl Acad Sci U S A. 2009 Dec 15;106(50):21109-14. doi: 10.1073/pnas.0908640106. Epub 2009 Dec 2.

5.

Structures of DNA polymerase beta with active-site mismatches suggest a transient abasic site intermediate during misincorporation.

Batra VK, Beard WA, Shock DD, Pedersen LC, Wilson SH.

Mol Cell. 2008 May 9;30(3):315-24. doi: 10.1016/j.molcel.2008.02.025.

6.

Incorrect nucleotide insertion at the active site of a G:A mismatch catalyzed by DNA polymerase beta.

Lin P, Batra VK, Pedersen LC, Beard WA, Wilson SH, Pedersen LG.

Proc Natl Acad Sci U S A. 2008 Apr 15;105(15):5670-4. doi: 10.1073/pnas.0801257105. Epub 2008 Apr 7.

7.

Substrate-induced DNA strand misalignment during catalytic cycling by DNA polymerase lambda.

Bebenek K, Garcia-Diaz M, Foley MC, Pedersen LC, Schlick T, Kunkel TA.

EMBO Rep. 2008 May;9(5):459-64. doi: 10.1038/embor.2008.33. Epub 2008 Mar 28.

8.

The X family portrait: structural insights into biological functions of X family polymerases.

Moon AF, Garcia-Diaz M, Batra VK, Beard WA, Bebenek K, Kunkel TA, Wilson SH, Pedersen LC.

DNA Repair (Amst). 2007 Dec 1;6(12):1709-25. Epub 2007 Jul 12. Review.

9.

Role of the catalytic metal during polymerization by DNA polymerase lambda.

Garcia-Diaz M, Bebenek K, Krahn JM, Pedersen LC, Kunkel TA.

DNA Repair (Amst). 2007 Sep 1;6(9):1333-40. Epub 2007 May 1.

10.

Promiscuous mismatch extension by human DNA polymerase lambda.

Picher AJ, García-Díaz M, Bebenek K, Pedersen LC, Kunkel TA, Blanco L.

Nucleic Acids Res. 2006 Jun 28;34(11):3259-66. Print 2006.

11.

Magnesium-induced assembly of a complete DNA polymerase catalytic complex.

Batra VK, Beard WA, Shock DD, Krahn JM, Pedersen LC, Wilson SH.

Structure. 2006 Apr;14(4):757-66.

12.

Structural analysis of strand misalignment during DNA synthesis by a human DNA polymerase.

Garcia-Diaz M, Bebenek K, Krahn JM, Pedersen LC, Kunkel TA.

Cell. 2006 Jan 27;124(2):331-42.

13.

Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.

Vaisman A, Ling H, Woodgate R, Yang W.

EMBO J. 2005 Sep 7;24(17):2957-67. Epub 2005 Aug 18.

14.

Nucleotide-induced DNA polymerase active site motions accommodating a mutagenic DNA intermediate.

Batra VK, Beard WA, Shock DD, Pedersen LC, Wilson SH.

Structure. 2005 Aug;13(8):1225-33.

15.

A closed conformation for the Pol lambda catalytic cycle.

Garcia-Diaz M, Bebenek K, Krahn JM, Kunkel TA, Pedersen LC.

Nat Struct Mol Biol. 2005 Jan;12(1):97-8. Epub 2004 Dec 19.

PMID:
15608652
16.

DNA polymerase fidelity: kinetics, structure, and checkpoints.

Joyce CM, Benkovic SJ.

Biochemistry. 2004 Nov 16;43(45):14317-24. Review.

PMID:
15533035
17.

Structures of mismatch replication errors observed in a DNA polymerase.

Johnson SJ, Beese LS.

Cell. 2004 Mar 19;116(6):803-16.

18.

A structural solution for the DNA polymerase lambda-dependent repair of DNA gaps with minimal homology.

Garcia-Diaz M, Bebenek K, Krahn JM, Blanco L, Kunkel TA, Pedersen LC.

Mol Cell. 2004 Feb 27;13(4):561-72.

19.

Enzymatic synthesis of deoxyribonucleic acid. I. Preparation of substrates and partial purification of an enzyme from Escherichia coli.

LEHMAN IR, BESSMAN MJ, SIMMS ES, KORNBERG A.

J Biol Chem. 1958 Jul;233(1):163-70. No abstract available.

20.

Genetical implications of the structure of deoxyribonucleic acid.

WATSON JD, CRICK FH.

Nature. 1953 May 30;171(4361):964-7. No abstract available.

PMID:
13063483
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