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Results: 1 to 20 of 53

References for PMC Articles for PubMed (Select 20547484)

1.

Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail.

Zhang Y, Jurkowska R, Soeroes S, Rajavelu A, Dhayalan A, Bock I, Rathert P, Brandt O, Reinhardt R, Fischle W, Jeltsch A.

Nucleic Acids Res. 2010 Jul;38(13):4246-53. doi: 10.1093/nar/gkq147. Epub 2010 Mar 11.

2.

Structural basis for acetylated histone H4 recognition by the human BRD2 bromodomain.

Umehara T, Nakamura Y, Jang MK, Nakano K, Tanaka A, Ozato K, Padmanabhan B, Yokoyama S.

J Biol Chem. 2010 Mar 5;285(10):7610-8. doi: 10.1074/jbc.M109.062422. Epub 2010 Jan 4.

3.

New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.

Rohde C, Zhang Y, Stamerjohanns H, Hecher K, Reinhardt R, Jeltsch A.

Biotechniques. 2009 Sep;47(3):781-3. doi: 10.2144/000113196.

4.

Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain.

Otani J, Nankumo T, Arita K, Inamoto S, Ariyoshi M, Shirakawa M.

EMBO Rep. 2009 Nov;10(11):1235-41. doi: 10.1038/embor.2009.218. Epub 2009 Oct 16.

5.

Structures of the dual bromodomains of the P-TEFb-activating protein Brd4 at atomic resolution.

Vollmuth F, Blankenfeldt W, Geyer M.

J Biol Chem. 2009 Dec 25;284(52):36547-56. doi: 10.1074/jbc.M109.033712. Epub 2009 Oct 13.

6.

Rethinking how DNA methylation patterns are maintained.

Jones PA, Liang G.

Nat Rev Genet. 2009 Nov;10(11):805-11. doi: 10.1038/nrg2651. Epub 2009 Sep 30.

7.

Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.

Jeong S, Liang G, Sharma S, Lin JC, Choi SH, Han H, Yoo CB, Egger G, Yang AS, Jones PA.

Mol Cell Biol. 2009 Oct;29(19):5366-76. doi: 10.1128/MCB.00484-09. Epub 2009 Jul 20.

8.

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.

Hodges E, Smith AD, Kendall J, Xuan Z, Ravi K, Rooks M, Zhang MQ, Ye K, Bhattacharjee A, Brizuela L, McCombie WR, Wigler M, Hannon GJ, Hicks JB.

Genome Res. 2009 Sep;19(9):1593-605. doi: 10.1101/gr.095190.109. Epub 2009 Jul 6.

9.

DNMT3B interacts with constitutive centromere protein CENP-C to modulate DNA methylation and the histone code at centromeric regions.

Gopalakrishnan S, Sullivan BA, Trazzi S, Della Valle G, Robertson KD.

Hum Mol Genet. 2009 Sep 1;18(17):3178-93. doi: 10.1093/hmg/ddp256. Epub 2009 May 29.

10.

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.

Ball MP, Li JB, Gao Y, Lee JH, LeProust EM, Park IH, Xie B, Daley GQ, Church GM.

Nat Biotechnol. 2009 Apr;27(4):361-8. doi: 10.1038/nbt.1533. Epub 2009 Mar 29. Erratum in: Nat Biotechnol. 2009 May;27(5):485.

11.

DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution.

Zhang Y, Rohde C, Tierling S, Jurkowski TP, Bock C, Santacruz D, Ragozin S, Reinhardt R, Groth M, Walter J, Jeltsch A.

PLoS Genet. 2009 Mar;5(3):e1000438. doi: 10.1371/journal.pgen.1000438. Epub 2009 Mar 27.

12.

Differential chromatin marking of introns and expressed exons by H3K36me3.

Kolasinska-Zwierz P, Down T, Latorre I, Liu T, Liu XS, Ahringer J.

Nat Genet. 2009 Mar;41(3):376-81. doi: 10.1038/ng.322. Epub 2009 Feb 1.

13.

SALL3 interacts with DNMT3A and shows the ability to inhibit CpG island methylation in hepatocellular carcinoma.

Shikauchi Y, Saiura A, Kubo T, Niwa Y, Yamamoto J, Murase Y, Yoshikawa H.

Mol Cell Biol. 2009 Apr;29(7):1944-58. doi: 10.1128/MCB.00840-08. Epub 2009 Jan 12.

14.

Formation of nucleoprotein filaments by mammalian DNA methyltransferase Dnmt3a in complex with regulator Dnmt3L.

Jurkowska RZ, Anspach N, Urbanke C, Jia D, Reinhardt R, Nellen W, Cheng X, Jeltsch A.

Nucleic Acids Res. 2008 Dec;36(21):6656-63. doi: 10.1093/nar/gkn747. Epub 2008 Oct 22.

15.

Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S.

Xu C, Cui G, Botuyan MV, Mer G.

Structure. 2008 Nov 12;16(11):1740-50. doi: 10.1016/j.str.2008.08.008. Epub 2008 Sep 25.

16.

Genome-scale DNA methylation maps of pluripotent and differentiated cells.

Meissner A, Mikkelsen TS, Gu H, Wernig M, Hanna J, Sivachenko A, Zhang X, Bernstein BE, Nusbaum C, Jaffe DB, Gnirke A, Jaenisch R, Lander ES.

Nature. 2008 Aug 7;454(7205):766-70. doi: 10.1038/nature07107. Epub 2008 Jul 6.

17.

Protein lysine methyltransferase G9a acts on non-histone targets.

Rathert P, Dhayalan A, Murakami M, Zhang X, Tamas R, Jurkowska R, Komatsu Y, Shinkai Y, Cheng X, Jeltsch A.

Nat Chem Biol. 2008 Jun;4(6):344-6. doi: 10.1038/nchembio.88. Epub 2008 Apr 27.

18.

Histone H4 lysine 20 monomethylation promotes transcriptional repression by L3MBTL1.

Kalakonda N, Fischle W, Boccuni P, Gurvich N, Hoya-Arias R, Zhao X, Miyata Y, Macgrogan D, Zhang J, Sims JK, Rice JC, Nimer SD.

Oncogene. 2008 Jul 17;27(31):4293-304. doi: 10.1038/onc.2008.67. Epub 2008 Apr 14.

19.

Mammalian DNA methyltransferases: a structural perspective.

Cheng X, Blumenthal RM.

Structure. 2008 Mar;16(3):341-50. doi: 10.1016/j.str.2008.01.004. Review.

20.
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