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Results: 1 to 20 of 34

1.

The mixed xylem sap proteome of Fusarium oxysporum-infected tomato plants.

Houterman PM, Speijer D, Dekker HL, DE Koster CG, Cornelissen BJ, Rep M.

Mol Plant Pathol. 2007 Mar;8(2):215-21. doi: 10.1111/j.1364-3703.2007.00384.x.

PMID:
20507493
[PubMed]
2.

The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.

Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S, Schwartz DC, Freitag M, Ma LJ, Danchin EG, Henrissat B, Coutinho PM, Nelson DR, Straney D, Napoli CA, Barker BM, Gribskov M, Rep M, Kroken S, Molnár I, Rensing C, Kennell JC, Zamora J, Farman ML, Selker EU, Salamov A, Shapiro H, Pangilinan J, Lindquist E, Lamers C, Grigoriev IV, Geiser DM, Covert SF, Temporini E, Vanetten HD.

PLoS Genet. 2009 Aug;5(8):e1000618. doi: 10.1371/journal.pgen.1000618. Epub 2009 Aug 28.

PMID:
19714214
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The effector protein Avr2 of the xylem-colonizing fungus Fusarium oxysporum activates the tomato resistance protein I-2 intracellularly.

Houterman PM, Ma L, van Ooijen G, de Vroomen MJ, Cornelissen BJ, Takken FL, Rep M.

Plant J. 2009 Jun;58(6):970-8. doi: 10.1111/j.1365-313X.2009.03838.x. Epub 2009 Feb 18.

PMID:
19228334
[PubMed - indexed for MEDLINE]
4.

Fusarium oxysporum hijacks COI1-mediated jasmonate signaling to promote disease development in Arabidopsis.

Thatcher LF, Manners JM, Kazan K.

Plant J. 2009 Jun;58(6):927-39. doi: 10.1111/j.1365-313X.2009.03831.x. Epub 2009 Feb 10.

PMID:
19220788
[PubMed - indexed for MEDLINE]
5.

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.

Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B.

Nucleic Acids Res. 2009 Jan;37(Database issue):D233-8. doi: 10.1093/nar/gkn663. Epub 2008 Oct 5.

PMID:
18838391
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Expression of effector gene SIX1 of Fusarium oxysporum requires living plant cells.

van der Does HC, Duyvesteijn RG, Goltstein PM, van Schie CC, Manders EM, Cornelissen BJ, Rep M.

Fungal Genet Biol. 2008 Sep;45(9):1257-64. doi: 10.1016/j.fgb.2008.06.002. Epub 2008 Jun 18.

PMID:
18606236
[PubMed - indexed for MEDLINE]
7.

Massive horizontal gene transfer in bdelloid rotifers.

Gladyshev EA, Meselson M, Arkhipova IR.

Science. 2008 May 30;320(5880):1210-3. doi: 10.1126/science.1156407.

PMID:
18511688
[PubMed - indexed for MEDLINE]
Free Article
8.

The presence of a virulence locus discriminates Fusarium oxysporum isolates causing tomato wilt from other isolates.

van der Does HC, Lievens B, Claes L, Houterman PM, Cornelissen BJ, Rep M.

Environ Microbiol. 2008 Jun;10(6):1475-85. doi: 10.1111/j.1462-2920.2007.01561.x. Epub 2008 Feb 26.

PMID:
18312397
[PubMed - indexed for MEDLINE]
9.

Expression profiles of genes encoded by the supernumerary chromosome controlling AM-toxin biosynthesis and pathogenicity in the apple pathotype of Alternaria alternata.

Harimoto Y, Hatta R, Kodama M, Yamamoto M, Otani H, Tsuge T.

Mol Plant Microbe Interact. 2007 Dec;20(12):1463-76.

PMID:
17990954
[PubMed - indexed for MEDLINE]
Free Article
10.

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC, Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Münsterkötter M, Nelson D, O'donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko IV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC.

Science. 2007 Sep 7;317(5843):1400-2.

PMID:
17823352
[PubMed - indexed for MEDLINE]
Free Article
11.

Molecular biology of Fusarium mycotoxins.

Desjardins AE, Proctor RH.

Int J Food Microbiol. 2007 Oct 20;119(1-2):47-50. Epub 2007 Jul 31. Review.

PMID:
17707105
[PubMed - indexed for MEDLINE]
12.

Classification and functional annotation of eukaryotic protein kinases.

Miranda-Saavedra D, Barton GJ.

Proteins. 2007 Sep 1;68(4):893-914.

PMID:
17557329
[PubMed - indexed for MEDLINE]
13.

The gene coding for a new transcription factor (ftf1) of Fusarium oxysporum is only expressed during infection of common bean.

Ramos B, Alves-Santos FM, García-Sánchez MA, Martín-Rodrigues N, Eslava AP, Díaz-Mínguez JM.

Fungal Genet Biol. 2007 Sep;44(9):864-76. Epub 2007 Mar 16.

PMID:
17462924
[PubMed - indexed for MEDLINE]
14.

Phytotoxicity and innate immune responses induced by Nep1-like proteins.

Qutob D, Kemmerling B, Brunner F, Küfner I, Engelhardt S, Gust AA, Luberacki B, Seitz HU, Stahl D, Rauhut T, Glawischnig E, Schween G, Lacombe B, Watanabe N, Lam E, Schlichting R, Scheel D, Nau K, Dodt G, Hubert D, Gijzen M, Nürnberger T.

Plant Cell. 2006 Dec;18(12):3721-44. Epub 2006 Dec 28.

PMID:
17194768
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Combo: a whole genome comparative browser.

Engels R, Yu T, Burge C, Mesirov JP, DeCaprio D, Galagan JE.

Bioinformatics. 2006 Jul 15;22(14):1782-3. Epub 2006 May 18.

PMID:
16709588
[PubMed - indexed for MEDLINE]
Free Article
16.

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.

Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Baştürkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Peñalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW.

Nature. 2005 Dec 22;438(7071):1105-15.

PMID:
16372000
[PubMed - indexed for MEDLINE]
17.

Biological profiling of gene groups utilizing Gene Ontology.

Blüthgen N, Brand K, Cajavec B, Swat M, Herzel H, Beule D.

Genome Inform. 2005;16(1):106-15.

PMID:
16362912
[PubMed - indexed for MEDLINE]
18.

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M.

Bioinformatics. 2005 Sep 15;21(18):3674-6. Epub 2005 Aug 4.

PMID:
16081474
[PubMed - indexed for MEDLINE]
Free Article
19.

The genome sequence of the rice blast fungus Magnaporthe grisea.

Dean RA, Talbot NJ, Ebbole DJ, Farman ML, Mitchell TK, Orbach MJ, Thon M, Kulkarni R, Xu JR, Pan H, Read ND, Lee YH, Carbone I, Brown D, Oh YY, Donofrio N, Jeong JS, Soanes DM, Djonovic S, Kolomiets E, Rehmeyer C, Li W, Harding M, Kim S, Lebrun MH, Bohnert H, Coughlan S, Butler J, Calvo S, Ma LJ, Nicol R, Purcell S, Nusbaum C, Galagan JE, Birren BW.

Nature. 2005 Apr 21;434(7036):980-6.

PMID:
15846337
[PubMed - indexed for MEDLINE]
20.

Visualization of comparative genomic analyses by BLAST score ratio.

Rasko DA, Myers GS, Ravel J.

BMC Bioinformatics. 2005 Jan 5;6:2.

PMID:
15634352
[PubMed - indexed for MEDLINE]
Free PMC Article

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