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Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae.

Azvolinsky A, Giresi PG, Lieb JD, Zakian VA.

Mol Cell. 2009 Jun 26;34(6):722-34. doi: 10.1016/j.molcel.2009.05.022.


The Saccharomyces cerevisiae Esc2 and Smc5-6 proteins promote sister chromatid junction-mediated intra-S repair.

Sollier J, Driscoll R, Castellucci F, Foiani M, Jackson SP, Branzei D.

Mol Biol Cell. 2009 Mar;20(6):1671-82. doi: 10.1091/mbc.E08-08-0875. Epub 2009 Jan 21.


Esc2 and Sgs1 act in functionally distinct branches of the homologous recombination repair pathway in Saccharomyces cerevisiae.

Mankouri HW, Ngo HP, Hickson ID.

Mol Biol Cell. 2009 Mar;20(6):1683-94. doi: 10.1091/mbc.E08-08-0877. Epub 2009 Jan 21.


Saccharomyces cerevisiae ATM orthologue suppresses break-induced chromosome translocations.

Lee K, Zhang Y, Lee SE.

Nature. 2008 Jul 24;454(7203):543-6. doi: 10.1038/nature07054.


Activation of the G2/M-specific gene CLB2 requires multiple cell cycle signals.

Veis J, Klug H, Koranda M, Ammerer G.

Mol Cell Biol. 2007 Dec;27(23):8364-73. Epub 2007 Oct 1.


A screen for suppressors of gross chromosomal rearrangements identifies a conserved role for PLP in preventing DNA lesions.

Kanellis P, Gagliardi M, Banath JP, Szilard RK, Nakada S, Galicia S, Sweeney FD, Cabelof DC, Olive PL, Durocher D.

PLoS Genet. 2007 Aug;3(8):e134.


Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals.

Kim JA, Kruhlak M, Dotiwala F, Nussenzweig A, Haber JE.

J Cell Biol. 2007 Jul 16;178(2):209-18.


Chromosome fragile sites.

Durkin SG, Glover TW.

Annu Rev Genet. 2007;41:169-92. Review.


Replication fork barriers: pausing for a break or stalling for time?

Labib K, Hodgson B.

EMBO Rep. 2007 Apr;8(4):346-53. Review.


The S. cerevisiae Rrm3p DNA helicase moves with the replication fork and affects replication of all yeast chromosomes.

Azvolinsky A, Dunaway S, Torres JZ, Bessler JB, Zakian VA.

Genes Dev. 2006 Nov 15;20(22):3104-16.


OriDB: a DNA replication origin database.

Nieduszynski CA, Hiraga S, Ak P, Benham CJ, Donaldson AD.

Nucleic Acids Res. 2007 Jan;35(Database issue):D40-6. Epub 2006 Oct 25.


Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast.

Raveendranathan M, Chattopadhyay S, Bolon YT, Haworth J, Clarke DJ, Bielinsky AK.

EMBO J. 2006 Aug 9;25(15):3627-39. Epub 2006 Aug 3.


An improved map of conserved regulatory sites for Saccharomyces cerevisiae.

MacIsaac KD, Wang T, Gordon DB, Gifford DK, Stormo GD, Fraenkel E.

BMC Bioinformatics. 2006 Mar 7;7:113.


Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast.

Admire A, Shanks L, Danzl N, Wang M, Weier U, Stevens W, Hunt E, Weinert T.

Genes Dev. 2006 Jan 15;20(2):159-73. Epub 2005 Dec 29.


Replisome instability, fork collapse, and gross chromosomal rearrangements arise synergistically from Mec1 kinase and RecQ helicase mutations.

Cobb JA, Schleker T, Rojas V, Bjergbaek L, Tercero JA, Gasser SM.

Genes Dev. 2005 Dec 15;19(24):3055-69.


Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning.

Guillemette B, Bataille AR, GĂ©vry N, Adam M, Blanchette M, Robert F, Gaudreau L.

PLoS Biol. 2005 Dec;3(12):e384. Epub 2005 Nov 1.


Genome-wide map of nucleosome acetylation and methylation in yeast.

Pokholok DK, Harbison CT, Levine S, Cole M, Hannett NM, Lee TI, Bell GW, Walker K, Rolfe PA, Herbolsheimer E, Zeitlinger J, Lewitter F, Gifford DK, Young RA.

Cell. 2005 Aug 26;122(4):517-27.


Histone H2A phosphorylation in DNA double-strand break repair.

Foster ER, Downs JA.

FEBS J. 2005 Jul;272(13):3231-40. Review.

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