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References for PMC Articles for PubMed (Select 19940126)


Minimal promoter systems reveal the importance of conserved residues in the B-finger of human transcription factor IIB.

Thompson NE, Glaser BT, Foley KM, Burton ZF, Burgess RR.

J Biol Chem. 2009 Sep 11;284(37):24754-66. doi: 10.1074/jbc.M109.030486. Epub 2009 Jul 9.


Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.

Sydow JF, Brueckner F, Cheung AC, Damsma GE, Dengl S, Lehmann E, Vassylyev D, Cramer P.

Mol Cell. 2009 Jun 26;34(6):710-21. doi: 10.1016/j.molcel.2009.06.002.


Rpb9 subunit controls transcription fidelity by delaying NTP sequestration in RNA polymerase II.

Walmacq C, Kireeva ML, Irvin J, Nedialkov Y, Lubkowska L, Malagon F, Strathern JN, Kashlev M.

J Biol Chem. 2009 Jul 17;284(29):19601-12. doi: 10.1074/jbc.M109.006908. Epub 2009 May 13.


Absolute gene occupancies by RNA polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae.

Soragni E, Kassavetis GA.

J Biol Chem. 2008 Sep 26;283(39):26568-76. doi: 10.1074/jbc.M803769200. Epub 2008 Jul 30.


Structure of eukaryotic RNA polymerases.

Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A.

Annu Rev Biophys. 2008;37:337-52. doi: 10.1146/annurev.biophys.37.032807.130008. Review.


Functions of Saccharomyces cerevisiae TFIIF during transcription start site utilization.

Khaperskyy DA, Ammerman ML, Majovski RC, Ponticelli AS.

Mol Cell Biol. 2008 Jun;28(11):3757-66. doi: 10.1128/MCB.02272-07. Epub 2008 Mar 24.


Functional architecture of RNA polymerase I.

Kuhn CD, Geiger SR, Baumli S, Gartmann M, Gerber J, Jennebach S, Mielke T, Tschochner H, Beckmann R, Cramer P.

Cell. 2007 Dec 28;131(7):1260-72.


The expanding RNA polymerase III transcriptome.

Dieci G, Fiorino G, Castelnuovo M, Teichmann M, Pagano A.

Trends Genet. 2007 Dec;23(12):614-22. Epub 2007 Oct 30. Review.


Archaeal transcription: function of an alternative transcription factor B from Pyrococcus furiosus.

Micorescu M, Grünberg S, Franke A, Cramer P, Thomm M, Bartlett M.

J Bacteriol. 2008 Jan;190(1):157-67. Epub 2007 Oct 26.


The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

Chen HT, Warfield L, Hahn S.

Nat Struct Mol Biol. 2007 Aug;14(8):696-703. Epub 2007 Jul 15.


Selectivity and proofreading both contribute significantly to the fidelity of RNA polymerase III transcription.

Alic N, Ayoub N, Landrieux E, Favry E, Baudouin-Cornu P, Riva M, Carles C.

Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10400-5. Epub 2007 Jun 6.


Insights into transcription initiation and termination from the electron microscopy structure of yeast RNA polymerase III.

Fernández-Tornero C, Böttcher B, Riva M, Carles C, Steuerwald U, Ruigrok RW, Sentenac A, Müller CW, Schoehn G.

Mol Cell. 2007 Mar 23;25(6):813-23.


Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis.

Wang D, Bushnell DA, Westover KD, Kaplan CD, Kornberg RD.

Cell. 2006 Dec 1;127(5):941-54.


Structural biology of RNA polymerase III: subcomplex C17/25 X-ray structure and 11 subunit enzyme model.

Jasiak AJ, Armache KJ, Martens B, Jansen RP, Cramer P.

Mol Cell. 2006 Jul 7;23(1):71-81.


A subcomplex of RNA polymerase III subunits involved in transcription termination and reinitiation.

Landrieux E, Alic N, Ducrot C, Acker J, Riva M, Carles C.

EMBO J. 2006 Jan 11;25(1):118-28. Epub 2005 Dec 15.


Reconfiguring the connectivity of a multiprotein complex: fusions of yeast TATA-binding protein with Brf1, and the function of transcription factor IIIB.

Kassavetis GA, Soragni E, Driscoll R, Geiduschek EP.

Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15406-11. Epub 2005 Oct 14.


Evidence that the Tfg1/Tfg2 dimer interface of TFIIF lies near the active center of the RNA polymerase II initiation complex.

Freire-Picos MA, Krishnamurthy S, Sun ZW, Hampsey M.

Nucleic Acids Res. 2005 Sep 7;33(16):5045-52. Print 2005.


Direct modulation of RNA polymerase core functions by basal transcription factors.

Werner F, Weinzierl RO.

Mol Cell Biol. 2005 Sep;25(18):8344-55.


The HHpred interactive server for protein homology detection and structure prediction.

Söding J, Biegert A, Lupas AN.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W244-8.

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