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Results: 1 to 20 of 43

1.

The genome and proteome of the Kluyvera bacteriophage Kvp1--another member of the T7-like Autographivirinae.

Lingohr EJ, Villegas A, She YM, Ceyssens PJ, Kropinski AM.

Virol J. 2008 Oct 20;5:122. doi: 10.1186/1743-422X-5-122.

PMID:
18937848
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples.

Williamson SJ, Rusch DB, Yooseph S, Halpern AL, Heidelberg KB, Glass JI, Andrews-Pfannkoch C, Fadrosh D, Miller CS, Sutton G, Frazier M, Venter JC.

PLoS One. 2008 Jan 23;3(1):e1456. doi: 10.1371/journal.pone.0001456.

PMID:
18213365
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Viral abundance and genome size distribution in the sediment and water column of marine and freshwater ecosystems.

Filippini M, Middelboe M.

FEMS Microbiol Ecol. 2007 Jun;60(3):397-410. Epub 2007 Mar 28.

PMID:
17391335
[PubMed - indexed for MEDLINE]
4.

Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus.

Pope WH, Weigele PR, Chang J, Pedulla ML, Ford ME, Houtz JM, Jiang W, Chiu W, Hatfull GF, Hendrix RW, King J.

J Mol Biol. 2007 May 11;368(4):966-81. Epub 2007 Feb 22.

PMID:
17383677
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

CAMERA: a community resource for metagenomics.

Seshadri R, Kravitz SA, Smarr L, Gilna P, Frazier M.

PLoS Biol. 2007 Mar;5(3):e75. No abstract available.

PMID:
17355175
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families.

Yooseph S, Sutton G, Rusch DB, Halpern AL, Williamson SJ, Remington K, Eisen JA, Heidelberg KB, Manning G, Li W, Jaroszewski L, Cieplak P, Miller CS, Li H, Mashiyama ST, Joachimiak MP, van Belle C, Chandonia JM, Soergel DA, Zhai Y, Natarajan K, Lee S, Raphael BJ, Bafna V, Friedman R, Brenner SE, Godzik A, Eisenberg D, Dixon JE, Taylor SS, Strausberg RL, Frazier M, Venter JC.

PLoS Biol. 2007 Mar;5(3):e16.

PMID:
17355171
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The marine viromes of four oceanic regions.

Angly FE, Felts B, Breitbart M, Salamon P, Edwards RA, Carlson C, Chan AM, Haynes M, Kelley S, Liu H, Mahaffy JM, Mueller JE, Nulton J, Olson R, Parsons R, Rayhawk S, Suttle CA, Rohwer F.

PLoS Biol. 2006 Nov;4(11):e368.

PMID:
17090214
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Stamatakis A.

Bioinformatics. 2006 Nov 1;22(21):2688-90. Epub 2006 Aug 23.

PMID:
16928733
[PubMed - indexed for MEDLINE]
Free Article
9.
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11.

Use of ultrafiltration to isolate viruses from seawater which are pathogens of marine phytoplankton.

Suttle CA, Chan AM, Cottrell MT.

Appl Environ Microbiol. 1991 Mar;57(3):721-6.

PMID:
16348439
[PubMed]
Free PMC Article
12.
13.

Viruses in the sea.

Suttle CA.

Nature. 2005 Sep 15;437(7057):356-61. Review.

PMID:
16163346
[PubMed - indexed for MEDLINE]
14.

Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere.

Filée J, Tétart F, Suttle CA, Krisch HM.

Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12471-6. Epub 2005 Aug 22.

PMID:
16116082
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

An algorithm for progressive multiple alignment of sequences with insertions.

Löytynoja A, Goldman N.

Proc Natl Acad Sci U S A. 2005 Jul 26;102(30):10557-62. Epub 2005 Jul 6.

PMID:
16000407
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Here a virus, there a virus, everywhere the same virus?

Breitbart M, Rohwer F.

Trends Microbiol. 2005 Jun;13(6):278-84. Review.

PMID:
15936660
[PubMed - indexed for MEDLINE]
17.

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations.

Sullivan MB, Coleman ML, Weigele P, Rohwer F, Chisholm SW.

PLoS Biol. 2005 May;3(5):e144. Epub 2005 Apr 19.

PMID:
15828858
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments.

Short CM, Suttle CA.

Appl Environ Microbiol. 2005 Jan;71(1):480-6.

PMID:
15640224
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The evolution of large DNA viruses: combining genomic information of viruses and their hosts.

Shackelton LA, Holmes EC.

Trends Microbiol. 2004 Oct;12(10):458-65. Review. No abstract available.

PMID:
15381195
[PubMed - indexed for MEDLINE]
20.

Global distribution of nearly identical phage-encoded DNA sequences.

Breitbart M, Miyake JH, Rohwer F.

FEMS Microbiol Lett. 2004 Jul 15;236(2):249-56. Erratum in: FEMS Microbiol Lett. 2006 Jan;254(2):332.

PMID:
15251204
[PubMed - indexed for MEDLINE]

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