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Results: 1 to 20 of 81

1.

Malleable machines take shape in eukaryotic transcriptional regulation.

Fuxreiter M, Tompa P, Simon I, Uversky VN, Hansen JC, Asturias FJ.

Nat Chem Biol. 2008 Dec;4(12):728-37. doi: 10.1038/nchembio.127. Review.

PMID:
19008886
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners.

Oldfield CJ, Meng J, Yang JY, Yang MQ, Uversky VN, Dunker AK.

BMC Genomics. 2008;9 Suppl 1:S1. doi: 10.1186/1471-2164-9-S1-S1.

PMID:
18366598
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Role of intrinsic flexibility in signal transduction mediated by the cell cycle regulator, p27 Kip1.

Galea CA, Nourse A, Wang Y, Sivakolundu SG, Heller WT, Kriwacki RW.

J Mol Biol. 2008 Feb 22;376(3):827-38. doi: 10.1016/j.jmb.2007.12.016. Epub 2007 Dec 14.

PMID:
18177895
[PubMed - indexed for MEDLINE]
Free PMC Article
4.
5.

Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions.

Tompa P, Fuxreiter M.

Trends Biochem Sci. 2008 Jan;33(1):2-8. Epub 2007 Nov 28.

PMID:
18054235
[PubMed - indexed for MEDLINE]
6.

Mining alpha-helix-forming molecular recognition features with cross species sequence alignments.

Cheng Y, Oldfield CJ, Meng J, Romero P, Uversky VN, Dunker AK.

Biochemistry. 2007 Nov 27;46(47):13468-77. Epub 2007 Nov 1.

PMID:
17973494
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Structural disorder promotes assembly of protein complexes.

Hegyi H, Schad E, Tompa P.

BMC Struct Biol. 2007 Oct 8;7:65.

PMID:
17922903
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Dynamic behavior of an intrinsically unstructured linker domain is conserved in the face of negligible amino acid sequence conservation.

Daughdrill GW, Narayanaswami P, Gilmore SH, Belczyk A, Brown CJ.

J Mol Evol. 2007 Sep;65(3):277-88. Epub 2007 Aug 25.

PMID:
17721672
[PubMed - indexed for MEDLINE]
9.

Composition Profiler: a tool for discovery and visualization of amino acid composition differences.

Vacic V, Uversky VN, Dunker AK, Lonardi S.

BMC Bioinformatics. 2007 Jun 19;8:211.

PMID:
17578581
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

Xie H, Vucetic S, Iakoucheva LM, Oldfield CJ, Dunker AK, Uversky VN, Obradovic Z.

J Proteome Res. 2007 May;6(5):1882-98. Epub 2007 Mar 29.

PMID:
17391014
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Local structural disorder imparts plasticity on linear motifs.

Fuxreiter M, Tompa P, Simon I.

Bioinformatics. 2007 Apr 15;23(8):950-6. Epub 2007 Mar 25.

PMID:
17387114
[PubMed - indexed for MEDLINE]
Free Article
12.

Identifying long-range structure in the intrinsically unstructured transactivation domain of p53.

Vise P, Baral B, Stancik A, Lowry DF, Daughdrill GW.

Proteins. 2007 May 15;67(3):526-30.

PMID:
17335006
[PubMed - indexed for MEDLINE]
13.

DisProt: the Database of Disordered Proteins.

Sickmeier M, Hamilton JA, LeGall T, Vacic V, Cortese MS, Tantos A, Szabo B, Tompa P, Chen J, Uversky VN, Obradovic Z, Dunker AK.

Nucleic Acids Res. 2007 Jan;35(Database issue):D786-93. Epub 2006 Dec 1.

PMID:
17145717
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The cyclin-dependent kinase 8 module sterically blocks Mediator interactions with RNA polymerase II.

Elmlund H, Baraznenok V, Lindahl M, Samuelsen CO, Koeck PJ, Holmberg S, Hebert H, Gustafsson CM.

Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15788-93. Epub 2006 Oct 16.

PMID:
17043218
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20.

Larivière L, Geiger S, Hoeppner S, Röther S, Strässer K, Cramer P.

Nat Struct Mol Biol. 2006 Oct;13(10):895-901. Epub 2006 Sep 10.

PMID:
16964259
[PubMed - indexed for MEDLINE]
16.

Analysis of molecular recognition features (MoRFs).

Mohan A, Oldfield CJ, Radivojac P, Vacic V, Cortese MS, Dunker AK, Uversky VN.

J Mol Biol. 2006 Oct 6;362(5):1043-59. Epub 2006 Aug 4.

PMID:
16935303
[PubMed - indexed for MEDLINE]
17.

Head module control of mediator interactions.

Takagi Y, Calero G, Komori H, Brown JA, Ehrensberger AH, Hudmon A, Asturias F, Kornberg RD.

Mol Cell. 2006 Aug 4;23(3):355-64.

PMID:
16885025
[PubMed - indexed for MEDLINE]
Free Article
18.

Intrinsic disorder in transcription factors.

Liu J, Perumal NB, Oldfield CJ, Su EW, Uversky VN, Dunker AK.

Biochemistry. 2006 Jun 6;45(22):6873-88.

PMID:
16734424
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.

Li W, Godzik A.

Bioinformatics. 2006 Jul 1;22(13):1658-9. Epub 2006 May 26.

PMID:
16731699
[PubMed - indexed for MEDLINE]
Free Article
20.

Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation.

Minezaki Y, Homma K, Kinjo AR, Nishikawa K.

J Mol Biol. 2006 Jun 16;359(4):1137-49. Epub 2006 Apr 25. Erratum in: J Mol Biol. 2006 Oct 13;363(1):309.

PMID:
16697407
[PubMed - indexed for MEDLINE]

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