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References for PMC Articles for PubMed (Select 19059333)


A domestic cat X chromosome linkage map and the sex-linked orange locus: mapping of orange, multiple origins and epistasis over nonagouti.

Schmidt-Küntzel A, Nelson G, David VA, Schäffer AA, Eizirik E, Roelke ME, Kehler JS, Hannah SS, O'Brien SJ, Menotti-Raymond M.

Genetics. 2009 Apr;181(4):1415-25. doi: 10.1534/genetics.108.095240. Epub 2009 Feb 2.


A high-resolution cat radiation hybrid and integrated FISH mapping resource for phylogenomic studies across Felidae.

Davis BW, Raudsepp T, Pearks Wilkerson AJ, Agarwala R, Schäffer AA, Houck M, Chowdhary BP, Murphy WJ.

Genomics. 2009 Apr;93(4):299-304. doi: 10.1016/j.ygeno.2008.09.010. Epub 2008 Nov 5.


State of cat genomics.

O'Brien SJ, Johnson W, Driscoll C, Pontius J, Pecon-Slattery J, Menotti-Raymond M.

Trends Genet. 2008 Jun;24(6):268-79. doi: 10.1016/j.tig.2008.03.004. Review.


A second-generation combined linkage physical map of the human genome.

Matise TC, Chen F, Chen W, De La Vega FM, Hansen M, He C, Hyland FC, Kennedy GC, Kong X, Murray SS, Ziegle JS, Stewart WC, Buyske S.

Genome Res. 2007 Dec;17(12):1783-6. Epub 2007 Nov 7.


Initial sequence and comparative analysis of the cat genome.

Pontius JU, Mullikin JC, Smith DR; Agencourt Sequencing Team, Lindblad-Toh K, Gnerre S, Clamp M, Chang J, Stephens R, Neelam B, Volfovsky N, Schäffer AA, Agarwala R, Narfström K, Murphy WJ, Giger U, Roca AL, Antunes A, Menotti-Raymond M, Yuhki N, Pecon-Slattery J, Johnson WE, Bourque G, Tesler G; NISC Comparative Sequencing Program, O'Brien SJ.

Genome Res. 2007 Nov;17(11):1675-89.


Four independent mutations in the feline fibroblast growth factor 5 gene determine the long-haired phenotype in domestic cats.

Kehler JS, David VA, Schäffer AA, Bajema K, Eizirik E, Ryugo DK, Hannah SS, O'Brien SJ, Menotti-Raymond M.

J Hered. 2007 Sep-Oct;98(6):555-66. Epub 2007 Sep 1.


Genome Annotation Resource Fields--GARFIELD: a genome browser for Felis catus.

Pontius JU, O'Brien SJ.

J Hered. 2007;98(5):386-9. Epub 2007 Jul 23.


Mutation in CEP290 discovered for cat model of human retinal degeneration.

Menotti-Raymond M, David VA, Schäffer AA, Stephens R, Wells D, Kumar-Singh R, O'Brien SJ, Narfström K.

J Hered. 2007 May-Jun;98(3):211-20. Epub 2007 May 16.


A high-resolution single nucleotide polymorphism genetic map of the mouse genome.

Shifman S, Bell JT, Copley RR, Taylor MS, Williams RW, Mott R, Flint J.

PLoS Biol. 2006 Nov;4(12):e395.


A 1.5-Mb-resolution radiation hybrid map of the cat genome and comparative analysis with the canine and human genomes.

Murphy WJ, Davis B, David VA, Agarwala R, Schäffer AA, Pearks Wilkerson AJ, Neelam B, O'Brien SJ, Menotti-Raymond M.

Genomics. 2007 Feb;89(2):189-96. Epub 2006 Sep 25.


An approximately 140-kb deletion associated with feline spinal muscular atrophy implies an essential LIX1 function for motor neuron survival.

Fyfe JC, Menotti-Raymond M, David VA, Brichta L, Schäffer AA, Agarwala R, Murphy WJ, Wedemeyer WJ, Gregory BL, Buzzell BG, Drummond MC, Wirth B, O'Brien SJ.

Genome Res. 2006 Sep;16(9):1084-90. Epub 2006 Aug 9.


A homozygous single-base deletion in MLPH causes the dilute coat color phenotype in the domestic cat.

Ishida Y, David VA, Eizirik E, Schäffer AA, Neelam BA, Roelke ME, Hannah SS, O'brien SJ, Menotti-Raymond M.

Genomics. 2006 Dec;88(6):698-705. Epub 2006 Jul 24.


The late Miocene radiation of modern Felidae: a genetic assessment.

Johnson WE, Eizirik E, Pecon-Slattery J, Murphy WJ, Antunes A, Teeling E, O'Brien SJ.

Science. 2006 Jan 6;311(5757):73-7.


Single linkage group per chromosome genetic linkage map for the horse, based on two three-generation, full-sibling, crossbred horse reference families.

Swinburne JE, Boursnell M, Hill G, Pettitt L, Allen T, Chowdhary B, Hasegawa T, Kurosawa M, Leeb T, Mashima S, Mickelson JR, Raudsepp T, Tozaki T, Binns M.

Genomics. 2006 Jan;87(1):1-29. Epub 2005 Nov 28.


An STR forensic typing system for genetic individualization of domestic cat (Felis catus) samples.

Menotti-Raymond MA, David VA, Wachter LL, Butler JM, O'Brien SJ.

J Forensic Sci. 2005 Sep;50(5):1061-70.


Tyrosinase and tyrosinase related protein 1 alleles specify domestic cat coat color phenotypes of the albino and brown loci.

Schmidt-Küntzel A, Eizirik E, O'Brien SJ, Menotti-Raymond M.

J Hered. 2005 Jul-Aug;96(4):289-301. Epub 2005 Apr 27.


Tyrosinase mutations associated with Siamese and Burmese patterns in the domestic cat (Felis catus).

Lyons LA, Imes DL, Rah HC, Grahn RA.

Anim Genet. 2005 Apr;36(2):119-26.


A comprehensive genetic map of the cattle genome based on 3802 microsatellites.

Ihara N, Takasuga A, Mizoshita K, Takeda H, Sugimoto M, Mizoguchi Y, Hirano T, Itoh T, Watanabe T, Reed KM, Snelling WM, Kappes SM, Beattie CW, Bennett GL, Sugimoto Y.

Genome Res. 2004 Oct;14(10A):1987-98.


Optimizing exact genetic linkage computations.

Fishelson M, Geiger D.

J Comput Biol. 2004;11(2-3):263-75.


Radiation hybrid mapping of 304 novel microsatellites in the domestic cat genome.

Menotti-Raymond M, David VA, Agarwala R, Schäffer AA, Stephens R, O'Brien SJ, Murphy WJ.

Cytogenet Genome Res. 2003;102(1-4):272-6.

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