Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 24

1.

KEGG Atlas mapping for global analysis of metabolic pathways.

Okuda S, Yamada T, Hamajima M, Itoh M, Katayama T, Bork P, Goto S, Kanehisa M.

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W423-6. doi: 10.1093/nar/gkn282. Epub 2008 May 13.

PMID:
18477636
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

KEGG for linking genomes to life and the environment.

Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y.

Nucleic Acids Res. 2008 Jan;36(Database issue):D480-4. Epub 2007 Dec 12.

PMID:
18077471
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The Pfam protein families database.

Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A.

Nucleic Acids Res. 2008 Jan;36(Database issue):D281-8. Epub 2007 Nov 26.

PMID:
18039703
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

Caspi R, Foerster H, Fulcher CA, Kaipa P, Krummenacker M, Latendresse M, Paley S, Rhee SY, Shearer AG, Tissier C, Walk TC, Zhang P, Karp PD.

Nucleic Acids Res. 2008 Jan;36(Database issue):D623-31. Epub 2007 Oct 27.

PMID:
17965431
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The influenza virus resource at the National Center for Biotechnology Information.

Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Zaslavsky L, Tatusova T, Ostell J, Lipman D.

J Virol. 2008 Jan;82(2):596-601. Epub 2007 Oct 17. No abstract available.

PMID:
17942553
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Multidimensional annotation of the Escherichia coli K-12 genome.

Karp PD, Keseler IM, Shearer A, Latendresse M, Krummenacker M, Paley SM, Paulsen I, Collado-Vides J, Gama-Castro S, Peralta-Gil M, Santos-Zavaleta A, Peñaloza-Spínola MI, Bonavides-Martinez C, Ingraham J.

Nucleic Acids Res. 2007;35(22):7577-90. Epub 2007 Oct 16.

PMID:
17940092
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

New developments in the InterPro database.

Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R, Courcelle E, Das U, Daugherty L, Dibley M, Finn R, Fleischmann W, Gough J, Haft D, Hulo N, Hunter S, Kahn D, Kanapin A, Kejariwal A, Labarga A, Langendijk-Genevaux PS, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Nikolskaya AN, Orchard S, Orengo C, Petryszak R, Selengut JD, Sigrist CJ, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C.

Nucleic Acids Res. 2007 Jan;35(Database issue):D224-8.

PMID:
17202162
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Geer LY, Kapustin Y, Khovayko O, Landsman D, Lipman DJ, Madden TL, Maglott DR, Ostell J, Miller V, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Sirotkin K, Souvorov A, Starchenko G, Tatusov RL, Tatusova TA, Wagner L, Yaschenko E.

Nucleic Acids Res. 2007 Jan;35(Database issue):D5-12. Epub 2006 Dec 14.

PMID:
17170002
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes.

Selengut JD, Haft DH, Davidsen T, Ganapathy A, Gwinn-Giglio M, Nelson WC, Richter AR, White O.

Nucleic Acids Res. 2007 Jan;35(Database issue):D260-4. Epub 2006 Dec 6.

PMID:
17151080
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

CDD: a conserved domain database for interactive domain family analysis.

Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, Hao L, He S, Hurwitz DI, Jackson JD, Ke Z, Krylov D, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Thanki N, Yamashita RA, Yin JJ, Zhang D, Bryant SH.

Nucleic Acids Res. 2007 Jan;35(Database issue):D237-40. Epub 2006 Nov 29.

PMID:
17135202
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

MMDB: annotating protein sequences with Entrez's 3D-structure database.

Wang Y, Addess KJ, Chen J, Geer LY, He J, He S, Lu S, Madej T, Marchler-Bauer A, Thiessen PA, Zhang N, Bryant SH.

Nucleic Acids Res. 2007 Jan;35(Database issue):D298-300. Epub 2006 Nov 29.

PMID:
17135201
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

MBGD: a platform for microbial comparative genomics based on the automated construction of orthologous groups.

Uchiyama I.

Nucleic Acids Res. 2007 Jan;35(Database issue):D343-6. Epub 2006 Nov 29.

PMID:
17135196
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.

Pruitt KD, Tatusova T, Maglott DR.

Nucleic Acids Res. 2007 Jan;35(Database issue):D61-5. Epub 2006 Nov 27.

PMID:
17130148
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Identification and functional verification of archaeal-type phosphoenolpyruvate carboxylase, a missing link in archaeal central carbohydrate metabolism.

Ettema TJ, Makarova KS, Jellema GL, Gierman HJ, Koonin EV, Huynen MA, de Vos WM, van der Oost J.

J Bacteriol. 2004 Nov;186(22):7754-62.

PMID:
15516590
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Edgar RC.

Nucleic Acids Res. 2004 Mar 19;32(5):1792-7. Print 2004.

PMID:
15034147
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

SMART 4.0: towards genomic data integration.

Letunic I, Copley RR, Schmidt S, Ciccarelli FD, Doerks T, Schultz J, Ponting CP, Bork P.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4.

PMID:
14681379
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

ACLAME: a CLAssification of Mobile genetic Elements.

Leplae R, Hebrant A, Wodak SJ, Toussaint A.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D45-9.

PMID:
14681355
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The COG database: an updated version includes eukaryotes.

Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Smirnov S, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA.

BMC Bioinformatics. 2003 Sep 11;4:41. Epub 2003 Sep 11.

PMID:
12969510
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003.

Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M.

Nucleic Acids Res. 2003 Jan 1;31(1):365-70.

PMID:
12520024
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Database resources of the National Center for Biotechnology Information.

Wheeler DL, Church DM, Lash AE, Leipe DD, Madden TL, Pontius JU, Schuler GD, Schriml LM, Tatusova TA, Wagner L, Rapp BA.

Nucleic Acids Res. 2001 Jan 1;29(1):11-6.

PMID:
11125038
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk