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Results: 1 to 20 of 39

References for PMC Articles for PubMed (Select 18723689)

1.

DNA physical properties determine nucleosome occupancy from yeast to fly.

Miele V, Vaillant C, d'Aubenton-Carafa Y, Thermes C, Grange T.

Nucleic Acids Res. 2008 Jun;36(11):3746-56. doi: 10.1093/nar/gkn262. Epub 2008 May 17.

2.

Dynamic regulation of nucleosome positioning in the human genome.

Schones DE, Cui K, Cuddapah S, Roh TY, Barski A, Wang Z, Wei G, Zhao K.

Cell. 2008 Mar 7;132(5):887-98. doi: 10.1016/j.cell.2008.02.022.

3.

A high-resolution atlas of nucleosome occupancy in yeast.

Lee W, Tillo D, Bray N, Morse RH, Davis RW, Hughes TR, Nislow C.

Nat Genet. 2007 Oct;39(10):1235-44. Epub 2007 Sep 16.

PMID:
17873876
4.

Transcription factor access to promoter elements.

Morse RH.

J Cell Biochem. 2007 Oct 15;102(3):560-70. Review.

PMID:
17668451
5.

Nucleosome positioning signals in genomic DNA.

Peckham HE, Thurman RE, Fu Y, Stamatoyannopoulos JA, Noble WS, Struhl K, Weng Z.

Genome Res. 2007 Aug;17(8):1170-7. Epub 2007 Jul 9.

6.

A novel roll-and-slide mechanism of DNA folding in chromatin: implications for nucleosome positioning.

Tolstorukov MY, Colasanti AV, McCandlish DM, Olson WK, Zhurkin VB.

J Mol Biol. 2007 Aug 17;371(3):725-38. Epub 2007 May 24.

7.

Nuclear organization of the genome and the potential for gene regulation.

Fraser P, Bickmore W.

Nature. 2007 May 24;447(7143):413-7. Review.

PMID:
17522674
8.

The role of chromatin during transcription.

Li B, Carey M, Workman JL.

Cell. 2007 Feb 23;128(4):707-19. Review.

9.

High-throughput mapping of the chromatin structure of human promoters.

Ozsolak F, Song JS, Liu XS, Fisher DE.

Nat Biotechnol. 2007 Feb;25(2):244-8. Epub 2007 Jan 14.

PMID:
17220878
10.

Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin.

Johnson SM, Tan FJ, McCullough HL, Riordan DP, Fire AZ.

Genome Res. 2006 Dec;16(12):1505-16. Epub 2006 Oct 12.

11.

Nucleosome positions predicted through comparative genomics.

Ioshikhes IP, Albert I, Zanton SJ, Pugh BF.

Nat Genet. 2006 Oct;38(10):1210-5. Epub 2006 Sep 10.

PMID:
16964265
12.

Nucleosome displacement in transcription.

Workman JL.

Genes Dev. 2006 Aug 1;20(15):2009-17. Review.

13.

A genomic code for nucleosome positioning.

Segal E, Fondufe-Mittendorf Y, Chen L, Thåström A, Field Y, Moore IK, Wang JP, Widom J.

Nature. 2006 Aug 17;442(7104):772-8. Epub 2006 Jul 19.

14.

Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

Sabo PJ, Kuehn MS, Thurman R, Johnson BE, Johnson EM, Cao H, Yu M, Rosenzweig E, Goldy J, Haydock A, Weaver M, Shafer A, Lee K, Neri F, Humbert R, Singer MA, Richmond TA, Dorschner MO, McArthur M, Hawrylycz M, Green RD, Navas PA, Noble WS, Stamatoyannopoulos JA.

Nat Methods. 2006 Jul;3(7):511-8.

PMID:
16791208
15.

Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning.

Guillemette B, Bataille AR, Gévry N, Adam M, Blanchette M, Robert F, Gaudreau L.

PLoS Biol. 2005 Dec;3(12):e384. Epub 2005 Nov 1.

16.

Genome-scale identification of nucleosome positions in S. cerevisiae.

Yuan GC, Liu YJ, Dion MF, Slack MD, Wu LF, Altschuler SJ, Rando OJ.

Science. 2005 Jul 22;309(5734):626-30. Epub 2005 Jun 16.

17.

Evidence for nucleosome depletion at active regulatory regions genome-wide.

Lee CK, Shibata Y, Rao B, Strahl BD, Lieb JD.

Nat Genet. 2004 Aug;36(8):900-5. Epub 2004 Jul 11.

PMID:
15247917
18.
19.

DNA helix: the importance of being GC-rich.

Vinogradov AE.

Nucleic Acids Res. 2003 Apr 1;31(7):1838-44.

20.

A role for chromatin remodeling in transcriptional termination by RNA polymerase II.

Alén C, Kent NA, Jones HS, O'Sullivan J, Aranda A, Proudfoot NJ.

Mol Cell. 2002 Dec;10(6):1441-52.

PMID:
12504018
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