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Results: 1 to 20 of 40

1.

Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade.

Ogasawara H, Hasegawa A, Kanda E, Miki T, Yamamoto K, Ishihama A.

J Bacteriol. 2007 Jul;189(13):4791-9. Epub 2007 Apr 27.

PMID:
17468243
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Alterations of cellular physiology in Escherichia coli in response to oxidative phosphorylation impaired by defective F1-ATPase.

Noda S, Takezawa Y, Mizutani T, Asakura T, Nishiumi E, Onoe K, Wada M, Tomita F, Matsushita K, Yokota A.

J Bacteriol. 2006 Oct;188(19):6869-76.

PMID:
16980490
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.

Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G 3rd, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL.

Nucleic Acids Res. 2006 Jan 5;34(1):1-9. Print 2006.

PMID:
16397293
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Effect of oxygen, and ArcA and FNR regulators on the expression of genes related to the electron transfer chain and the TCA cycle in Escherichia coli.

Shalel-Levanon S, San KY, Bennett GN.

Metab Eng. 2005 Sep-Nov;7(5-6):364-74. Epub 2005 Sep 2.

PMID:
16140031
[PubMed - indexed for MEDLINE]
5.

Systematic search for the Cra-binding promoters using genomic SELEX system.

Shimada T, Fujita N, Maeda M, Ishihama A.

Genes Cells. 2005 Sep;10(9):907-18.

PMID:
16115199
[PubMed - indexed for MEDLINE]
6.

Identification of the CRP regulon using in vitro and in vivo transcriptional profiling.

Zheng D, Constantinidou C, Hobman JL, Minchin SD.

Nucleic Acids Res. 2004 Nov 1;32(19):5874-93. Print 2004.

PMID:
15520470
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Classification and strength measurement of stationary-phase promoters by use of a newly developed promoter cloning vector.

Shimada T, Makinoshima H, Ogawa Y, Miki T, Maeda M, Ishihama A.

J Bacteriol. 2004 Nov;186(21):7112-22.

PMID:
15489422
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Regulation of ndh expression in Escherichia coli by Fis.

Jackson L, Blake T, Green J.

Microbiology. 2004 Feb;150(Pt 2):407-13.

PMID:
14766919
[PubMed - indexed for MEDLINE]
Free Article
9.

Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR.

Salmon K, Hung SP, Mekjian K, Baldi P, Hatfield GW, Gunsalus RP.

J Biol Chem. 2003 Aug 8;278(32):29837-55. Epub 2003 May 15.

PMID:
12754220
[PubMed - indexed for MEDLINE]
Free Article
10.

Two different modes of transcription repression of the Escherichia coli acetate operon by IclR.

Yamamoto K, Ishihama A.

Mol Microbiol. 2003 Jan;47(1):183-94.

PMID:
12492863
[PubMed - indexed for MEDLINE]
11.

Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two-component system sensing external magnesium availability.

Yamamoto K, Ogasawara H, Fujita N, Utsumi R, Ishihama A.

Mol Microbiol. 2002 Jul;45(2):423-38.

PMID:
12123454
[PubMed - indexed for MEDLINE]
12.

Fractionation of Escherichia coli cell populations at different stages during growth transition to stationary phase.

Makinoshima H, Nishimura A, Ishihama A.

Mol Microbiol. 2002 Jan;43(2):269-79.

PMID:
11985708
[PubMed - indexed for MEDLINE]
13.

Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products.

Wyborn NR, Messenger SL, Henderson RA, Sawers G, Roberts RE, Attwood MM, Green J.

Microbiology. 2002 Apr;148(Pt 4):1015-26.

PMID:
11932447
[PubMed - indexed for MEDLINE]
Free Article
14.

Speed versus efficiency in microbial growth and the role of parallel pathways.

Helling RB.

J Bacteriol. 2002 Feb;184(4):1041-5.

PMID:
11807064
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A novel promoter architecture for microaerobic activation by the anaerobic transcription factor FNR.

Marshall FA, Messenger SL, Wyborn NR, Guest JR, Wing H, Busby SJ, Green J.

Mol Microbiol. 2001 Feb;39(3):747-53.

PMID:
11169114
[PubMed - indexed for MEDLINE]
16.

Effects of limited aeration and of the ArcAB system on intermediary pyruvate catabolism in Escherichia coli.

Alexeeva S, de Kort B, Sawers G, Hellingwerf KJ, de Mattos MJ.

J Bacteriol. 2000 Sep;182(17):4934-40.

PMID:
10940038
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid.

Ali Azam T, Iwata A, Nishimura A, Ueda S, Ishihama A.

J Bacteriol. 1999 Oct;181(20):6361-70.

PMID:
10515926
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis.

Blankenhorn D, Phillips J, Slonczewski JL.

J Bacteriol. 1999 Apr;181(7):2209-16.

PMID:
10094700
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Co-regulation of lipoamide dehydrogenase and 2-oxoglutarate dehydrogenase synthesis in Escherichia coli: characterisation of an ArcA binding site in the lpd promoter.

Cunningham L, Georgellis D, Green J, Guest JR.

FEMS Microbiol Lett. 1998 Dec 15;169(2):403-8.

PMID:
9868788
[PubMed - indexed for MEDLINE]
20.

Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing face of FNR.

Green J, Baldwin ML, Richardson J.

Mol Microbiol. 1998 Aug;29(4):1113-23.

PMID:
9767578
[PubMed - indexed for MEDLINE]
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