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Results: 1 to 20 of 34

1.

Methanosarcina acetivorans sp. nov., an Acetotrophic Methane-Producing Bacterium Isolated from Marine Sediments.

Sowers KR, Baron SF, Ferry JG.

Appl Environ Microbiol. 1984 May;47(5):971-8.

PMID:
16346552
[PubMed]
Free PMC Article
2.

Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox.

Brochier C, Forterre P, Gribaldo S.

Genome Biol. 2004;5(3):R17. Epub 2004 Feb 26.

PMID:
15003120
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Tracing the evolution of gene loss in obligate bacterial symbionts.

Moran NA.

Curr Opin Microbiol. 2003 Oct;6(5):512-8. Review.

PMID:
14572545
[PubMed - indexed for MEDLINE]
4.

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism.

Waters E, Hohn MJ, Ahel I, Graham DE, Adams MD, Barnstead M, Beeson KY, Bibbs L, Bolanos R, Keller M, Kretz K, Lin X, Mathur E, Ni J, Podar M, Richardson T, Sutton GG, Simon M, Soll D, Stetter KO, Short JM, Noordewier M.

Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12984-8. Epub 2003 Oct 17.

PMID:
14566062
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.

Guindon S, Gascuel O.

Syst Biol. 2003 Oct;52(5):696-704.

PMID:
14530136
[PubMed - indexed for MEDLINE]
6.

Thermococcus gammatolerans sp. nov., a hyperthermophilic archaeon from a deep-sea hydrothermal vent that resists ionizing radiation.

Jolivet E, L'Haridon S, Corre E, Forterre P, Prieur D.

Int J Syst Evol Microbiol. 2003 May;53(Pt 3):847-51.

PMID:
12807211
[PubMed - indexed for MEDLINE]
Free Article
7.

Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii.

Saunders NF, Thomas T, Curmi PM, Mattick JS, Kuczek E, Slade R, Davis J, Franzmann PD, Boone D, Rusterholtz K, Feldman R, Gates C, Bench S, Sowers K, Kadner K, Aerts A, Dehal P, Detter C, Glavina T, Lucas S, Richardson P, Larimer F, Hauser L, Land M, Cavicchioli R.

Genome Res. 2003 Jul;13(7):1580-8. Epub 2003 Jun 12.

PMID:
12805271
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The phylum Nanoarchaeota: present knowledge and future perspectives of a unique form of life.

Huber H, Hohn MJ, Stetter KO, Rachel R.

Res Microbiol. 2003 Apr;154(3):165-71. Review.

PMID:
12706504
[PubMed - indexed for MEDLINE]
9.

Phylogenomics of type II DNA topoisomerases.

Gadelle D, Filée J, Buhler C, Forterre P.

Bioessays. 2003 Mar;25(3):232-42. Review.

PMID:
12596227
[PubMed - indexed for MEDLINE]
10.

Evolution of the Archaea.

Forterre P, Brochier C, Philippe H.

Theor Popul Biol. 2002 Jun;61(4):409-22. Review.

PMID:
12167361
[PubMed - indexed for MEDLINE]
11.

Ancient phylogenetic relationships.

Gribaldo S, Philippe H.

Theor Popul Biol. 2002 Jun;61(4):391-408. Review.

PMID:
12167360
[PubMed - indexed for MEDLINE]
12.

The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.

Deppenmeier U, Johann A, Hartsch T, Merkl R, Schmitz RA, Martinez-Arias R, Henne A, Wiezer A, Bäumer S, Jacobi C, Brüggemann H, Lienard T, Christmann A, Bömeke M, Steckel S, Bhattacharyya A, Lykidis A, Overbeek R, Klenk HP, Gunsalus RP, Fritz HJ, Gottschalk G.

J Mol Microbiol Biotechnol. 2002 Jul;4(4):453-61.

PMID:
12125824
[PubMed - indexed for MEDLINE]
13.

A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific protein.

Forterre P.

Trends Genet. 2002 May;18(5):236-7.

PMID:
12047940
[PubMed - indexed for MEDLINE]
14.

Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang.

Dacks JB, Marinets A, Ford Doolittle W, Cavalier-Smith T, Logsdon JM Jr.

Mol Biol Evol. 2002 Jun;19(6):830-40.

PMID:
12032239
[PubMed - indexed for MEDLINE]
Free Article
15.

A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont.

Huber H, Hohn MJ, Rachel R, Fuchs T, Wimmer VC, Stetter KO.

Nature. 2002 May 2;417(6884):63-7.

PMID:
11986665
[PubMed - indexed for MEDLINE]
16.

Archaeal phylogeny based on ribosomal proteins.

Matte-Tailliez O, Brochier C, Forterre P, Philippe H.

Mol Biol Evol. 2002 May;19(5):631-9.

PMID:
11961097
[PubMed - indexed for MEDLINE]
Free Article
17.

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing.

Schmidt HA, Strimmer K, Vingron M, von Haeseler A.

Bioinformatics. 2002 Mar;18(3):502-4.

PMID:
11934758
[PubMed - indexed for MEDLINE]
Free Article
18.

The genome of M. acetivorans reveals extensive metabolic and physiological diversity.

Galagan JE, Nusbaum C, Roy A, Endrizzi MG, Macdonald P, FitzHugh W, Calvo S, Engels R, Smirnov S, Atnoor D, Brown A, Allen N, Naylor J, Stange-Thomann N, DeArellano K, Johnson R, Linton L, McEwan P, McKernan K, Talamas J, Tirrell A, Ye W, Zimmer A, Barber RD, Cann I, Graham DE, Grahame DA, Guss AM, Hedderich R, Ingram-Smith C, Kuettner HC, Krzycki JA, Leigh JA, Li W, Liu J, Mukhopadhyay B, Reeve JN, Smith K, Springer TA, Umayam LA, White O, White RH, Conway de Macario E, Ferry JG, Jarrell KF, Jing H, Macario AJ, Paulsen I, Pritchett M, Sowers KR, Swanson RV, Zinder SH, Lander E, Metcalf WW, Birren B.

Genome Res. 2002 Apr;12(4):532-42.

PMID:
11932238
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.

Slesarev AI, Mezhevaya KV, Makarova KS, Polushin NN, Shcherbinina OV, Shakhova VV, Belova GI, Aravind L, Natale DA, Rogozin IB, Tatusov RL, Wolf YI, Stetter KO, Malykh AG, Koonin EV, Kozyavkin SA.

Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4644-9.

PMID:
11930014
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genome size reduction through multiple events of gene disintegration in Buchnera APS.

Silva FJ, Latorre A, Moya A.

Trends Genet. 2001 Nov;17(11):615-8.

PMID:
11672844
[PubMed - indexed for MEDLINE]
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