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Items: 1 to 20 of 132

1.

Three-dimensional folding of an RNA hairpin required for packaging HIV-1.

Pappalardo L, Kerwood DJ, Pelczer I, Borer PN.

J Mol Biol. 1998 Oct 2;282(4):801-18.

PMID:
9743628
2.

NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.

Amarasinghe GK, De Guzman RN, Turner RB, Summers MF.

J Mol Biol. 2000 May 26;299(1):145-56.

PMID:
10860728
3.

The major HIV-1 packaging signal is an extended bulged stem loop whose structure is altered on interaction with the Gag polyprotein.

Zeffman A, Hassard S, Varani G, Lever A.

J Mol Biol. 2000 Apr 7;297(4):877-93. Erratum in: J Mol biol 2000 Sep 1;301(5):1315.

PMID:
10736224
4.

Stem-loop SL4 of the HIV-1 psi RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition.

Amarasinghe GK, Zhou J, Miskimon M, Chancellor KJ, McDonald JA, Matthews AG, Miller RR, Rouse MD, Summers MF.

J Mol Biol. 2001 Dec 14;314(5):961-70.

PMID:
11743714
5.

NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.

Amarasinghe GK, De Guzman RN, Turner RB, Chancellor KJ, Wu ZR, Summers MF.

J Mol Biol. 2000 Aug 11;301(2):491-511.

PMID:
10926523
6.

Structure of SL4 RNA from the HIV-1 packaging signal.

Kerwood DJ, Cavaluzzi MJ, Borer PN.

Biochemistry. 2001 Dec 4;40(48):14518-29.

PMID:
11724565
7.

HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.

Kieken F, Arnoult E, Barbault F, Paquet F, Huynh-Dinh T, Paoletti J, Genest D, Lancelot G.

Eur Biophys J. 2002 Dec;31(7):521-31. Epub 2002 Oct 10.

PMID:
12451421
9.

Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element.

De Guzman RN, Wu ZR, Stalling CC, Pappalardo L, Borer PN, Summers MF.

Science. 1998 Jan 16;279(5349):384-8.

10.
11.

Structure of the intact stem and bulge of HIV-1 Psi-RNA stem-loop SL1.

Lawrence DC, Stover CC, Noznitsky J, Wu Z, Summers MF.

J Mol Biol. 2003 Feb 14;326(2):529-42.

PMID:
12559920
12.
13.

Stem of SL1 RNA in HIV-1: structure and nucleocapsid protein binding for a 1 x 3 internal loop.

Yuan Y, Kerwood DJ, Paoletti AC, Shubsda MF, Borer PN.

Biochemistry. 2003 May 13;42(18):5259-69.

PMID:
12731867
15.

Structure and dimerization of HIV-1 kissing loop aptamers.

Lodmell JS, Ehresmann C, Ehresmann B, Marquet R.

J Mol Biol. 2001 Aug 17;311(3):475-90.

PMID:
11493002
17.

Affinities of packaging domain loops in HIV-1 RNA for the nucleocapsid protein.

Shubsda MF, Paoletti AC, Hudson BS, Borer PN.

Biochemistry. 2002 Apr 23;41(16):5276-82.

PMID:
11955077
19.

Structure and stability of wild-type and mutant RNA internal loops from the SL-1 domain of the HIV-1 packaging signal.

Greatorex J, Gallego J, Varani G, Lever A.

J Mol Biol. 2002 Sep 20;322(3):543-57.

PMID:
12225748
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