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Results: 1 to 20 of 121

1.

Structure of the dimer initiation complex of HIV-1 genomic RNA.

Mujeeb A, Clever JL, Billeci TM, James TL, Parslow TG.

Nat Struct Biol. 1998 Jun;5(6):432-6.

PMID:
9628479
[PubMed - indexed for MEDLINE]
2.

NMR structure of the mature dimer initiation complex of HIV-1 genomic RNA.

Mujeeb A, Parslow TG, Zarrinpar A, Das C, James TL.

FEBS Lett. 1999 Sep 24;458(3):387-92.

PMID:
10570946
[PubMed - indexed for MEDLINE]
Free Article
3.

The dimer initiation site hairpin mediates dimerization of the human immunodeficiency virus, type 2 RNA genome.

Dirac AM, Huthoff H, Kjems J, Berkhout B.

J Biol Chem. 2001 Aug 24;276(34):32345-52. Epub 2001 Jun 7.

PMID:
11397802
[PubMed - indexed for MEDLINE]
Free Article
4.

The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges.

Ennifar E, Yusupov M, Walter P, Marquet R, Ehresmann B, Ehresmann C, Dumas P.

Structure. 1999 Nov 15;7(11):1439-49.

PMID:
10574792
[PubMed - indexed for MEDLINE]
5.

Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

Clever JL, Wong ML, Parslow TG.

J Virol. 1996 Sep;70(9):5902-8.

PMID:
8709210
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Mechanism of hairpin-duplex conversion for the HIV-1 dimerization initiation site.

Bernacchi S, Ennifar E, Tóth K, Walter P, Langowski J, Dumas P.

J Biol Chem. 2005 Dec 2;280(48):40112-21. Epub 2005 Sep 15.

PMID:
16169845
[PubMed - indexed for MEDLINE]
Free Article
7.

HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.

Kieken F, Arnoult E, Barbault F, Paquet F, Huynh-Dinh T, Paoletti J, Genest D, Lancelot G.

Eur Biophys J. 2002 Dec;31(7):521-31. Epub 2002 Oct 10.

PMID:
12451421
[PubMed - indexed for MEDLINE]
8.

Solution studies of the dimerization initiation site of HIV-1 genomic RNA.

Dardel F, Marquet R, Ehresmann C, Ehresmann B, Blanquet S.

Nucleic Acids Res. 1998 Aug 1;26(15):3567-71.

PMID:
9671820
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

NMR structure of the full-length linear dimer of stem-loop-1 RNA in the HIV-1 dimer initiation site.

Ulyanov NB, Mujeeb A, Du Z, Tonelli M, Parslow TG, James TL.

J Biol Chem. 2006 Jun 9;281(23):16168-77. Epub 2006 Apr 6.

PMID:
16603544
[PubMed - indexed for MEDLINE]
Free Article
11.

Variant effects of non-native kissing-loop hairpin palindromes on HIV replication and HIV RNA dimerization: role of stem-loop B in HIV replication and HIV RNA dimerization.

Laughrea M, Shen N, Jetté L, Wainberg MA.

Biochemistry. 1999 Jan 5;38(1):226-34.

PMID:
9890902
[PubMed - indexed for MEDLINE]
12.

The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement.

Chang KY, Tinoco I Jr.

J Mol Biol. 1997 May 30;269(1):52-66.

PMID:
9193000
[PubMed - indexed for MEDLINE]
13.

Polymorphism of bulged-out residues in HIV-1 RNA DIS kissing complex and structure comparison with solution studies.

Ennifar E, Dumas P.

J Mol Biol. 2006 Feb 24;356(3):771-82. Epub 2005 Dec 21.

PMID:
16403527
[PubMed - indexed for MEDLINE]
14.

Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding.

Mujeeb A, Ulyanov NB, Georgantis S, Smirnov I, Chung J, Parslow TG, James TL.

Nucleic Acids Res. 2007;35(6):2026-34. Epub 2007 Mar 6.

PMID:
17341460
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Conformational transitions of flanking purines in HIV-1 RNA dimerization initiation site kissing complexes studied by CHARMM explicit solvent molecular dynamics.

Sarzyńska J, Réblová K, Sponer J, Kuliński T.

Biopolymers. 2008 Sep;89(9):732-46. doi: 10.1002/bip.21001.

PMID:
18412127
[PubMed - indexed for MEDLINE]
16.

MD studies of the DIS/DIS kissing complex solution and x-ray structures.

Beaurain F, Laguerre M.

Oligonucleotides. 2003;13(6):501-14.

PMID:
15025916
[PubMed - indexed for MEDLINE]
17.

Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1.

Haddrick M, Lear AL, Cann AJ, Heaphy S.

J Mol Biol. 1996 May 31;259(1):58-68.

PMID:
8648648
[PubMed - indexed for MEDLINE]
18.

Requirements for RNA heterodimerization of the human immunodeficiency virus type 1 (HIV-1) and HIV-2 genomes.

Dirac AM, Huthoff H, Kjems J, Berkhout B.

J Gen Virol. 2002 Oct;83(Pt 10):2533-42.

PMID:
12237437
[PubMed - indexed for MEDLINE]
Free Article
19.

The HIV-1(Lai) RNA dimerization. Thermodynamic parameters associated with the transition from the kissing complex to the extended dimer.

Theilleux-Delalande V, Girard F, Huynh-Dinh T, Lancelot G, Paoletti J.

Eur J Biochem. 2000 May;267(9):2711-9.

PMID:
10785394
[PubMed - indexed for MEDLINE]
Free Article
20.

Structure of the intact stem and bulge of HIV-1 Psi-RNA stem-loop SL1.

Lawrence DC, Stover CC, Noznitsky J, Wu Z, Summers MF.

J Mol Biol. 2003 Feb 14;326(2):529-42.

PMID:
12559920
[PubMed - indexed for MEDLINE]

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