Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 165

1.

Simulations of the structural and dynamical properties of denatured proteins: the "molten coil" state of bovine pancreatic trypsin inhibitor.

Kazmirski SL, Daggett V.

J Mol Biol. 1998 Mar 27;277(2):487-506.

PMID:
9514766
[PubMed - indexed for MEDLINE]
2.

Towards a complete description of the structural and dynamic properties of the denatured state of barnase and the role of residual structure in folding.

Wong KB, Clarke J, Bond CJ, Neira JL, Freund SM, Fersht AR, Daggett V.

J Mol Biol. 2000 Mar 10;296(5):1257-82.

PMID:
10698632
[PubMed - indexed for MEDLINE]
3.

Analysis methods for comparison of multiple molecular dynamics trajectories: applications to protein unfolding pathways and denatured ensembles.

Kazmirski SL, Li A, Daggett V.

J Mol Biol. 1999 Jul 2;290(1):283-304.

PMID:
10388573
[PubMed - indexed for MEDLINE]
4.

Protein unfolding pathways explored through molecular dynamics simulations.

Daggett V, Levitt M.

J Mol Biol. 1993 Jul 20;232(2):600-19.

PMID:
7688428
[PubMed - indexed for MEDLINE]
5.

Acid and thermal denaturation of barnase investigated by molecular dynamics simulations.

Caflisch A, Karplus M.

J Mol Biol. 1995 Oct 6;252(5):672-708.

PMID:
7563082
[PubMed - indexed for MEDLINE]
6.

Unfolding and refolding of the native structure of bovine pancreatic trypsin inhibitor studied by computer simulations.

Hao MH, Pincus MR, Rackovsky S, Scheraga HA.

Biochemistry. 1993 Sep 21;32(37):9614-31.

PMID:
7690589
[PubMed - indexed for MEDLINE]
7.

Molecular dynamics simulation of the unfolding of the human prion protein domain under low pH and high temperature conditions.

Gu W, Wang T, Zhu J, Shi Y, Liu H.

Biophys Chem. 2003 May 1;104(1):79-94.

PMID:
12834829
[PubMed - indexed for MEDLINE]
8.

Nonlocal interactions stabilize long range loops in the initial folding intermediates of reduced bovine pancreatic trypsin inhibitor.

Ittah V, Haas E.

Biochemistry. 1995 Apr 4;34(13):4493-506.

PMID:
7535565
[PubMed - indexed for MEDLINE]
9.
10.

Reduced BPTI is collapsed. A pulsed field gradient NMR study of unfolded and partially folded bovine pancreatic trypsin inhibitor.

Pan H, Barany G, Woodward C.

Protein Sci. 1997 Sep;6(9):1985-92.

PMID:
9300498
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Detection of local structures in reduced unfolded bovine pancreatic trypsin inhibitor.

Amir D, Krausz S, Haas E.

Proteins. 1992 Apr;13(2):162-73.

PMID:
1377825
[PubMed - indexed for MEDLINE]
12.

The folding pathway of ubiquitin from all-atom molecular dynamics simulations.

Marianayagam NJ, Jackson SE.

Biophys Chem. 2004 Oct 1;111(2):159-71.

PMID:
15381313
[PubMed - indexed for MEDLINE]
13.

A model of the molten globule state from molecular dynamics simulations.

Daggett V, Levitt M.

Proc Natl Acad Sci U S A. 1992 Jun 1;89(11):5142-6.

PMID:
1594623
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Exploration of partially unfolded states of human alpha-lactalbumin by molecular dynamics simulation.

Paci E, Smith LJ, Dobson CM, Karplus M.

J Mol Biol. 2001 Feb 16;306(2):329-47.

PMID:
11237603
[PubMed - indexed for MEDLINE]
15.

Molecular origin of constant m-values, denatured state collapse, and residue-dependent transition midpoints in globular proteins.

O'Brien EP, Brooks BR, Thirumalai D.

Biochemistry. 2009 May 5;48(17):3743-54. doi: 10.1021/bi8021119.

PMID:
19278261
[PubMed - indexed for MEDLINE]
16.

Molecular dynamics simulation of the acidic compact state of apomyoglobin from yellowfin tuna.

Bismuto E, Di Maggio E, Pleus S, Sikor M, Röcker C, Nienhaus GU, Lamb DC.

Proteins. 2009 Feb 1;74(2):273-90. doi: 10.1002/prot.22149.

PMID:
18618699
[PubMed - indexed for MEDLINE]
17.

Molecular mechanisms of pressure induced conformational changes in BPTI.

Wroblowski B, Díaz JF, Heremans K, Engelborghs Y.

Proteins. 1996 Aug;25(4):446-55.

PMID:
8865340
[PubMed - indexed for MEDLINE]
18.

Molecular dynamics simulations of hydrophobic collapse of ubiquitin.

Alonso DO, Daggett V.

Protein Sci. 1998 Apr;7(4):860-74.

PMID:
9568893
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

NMR-detected order in core residues of denatured bovine pancreatic trypsin inhibitor.

Barbar E, Hare M, Makokha M, Barany G, Woodward C.

Biochemistry. 2001 Aug 14;40(32):9734-42.

PMID:
11583174
[PubMed - indexed for MEDLINE]
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk