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Items: 1 to 20 of 139

1.

Sensitive and specific peak detection for SELDI-TOF mass spectrometry using a wavelet/neural-network based approach.

Emanuele VA 2nd, Panicker G, Gurbaxani BM, Lin JM, Unger ER.

PLoS One. 2012;7(11):e48103. doi: 10.1371/journal.pone.0048103. Epub 2012 Nov 12.

2.

Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching.

Du P, Kibbe WA, Lin SM.

Bioinformatics. 2006 Sep 1;22(17):2059-65. Epub 2006 Jul 4.

3.

Application of serum protein fingerprinting coupled with artificial neural network model in diagnosis of hepatocellular carcinoma.

Wang JX, Zhang B, Yu JK, Liu J, Yang MQ, Zheng S.

Chin Med J (Engl). 2005 Aug 5;118(15):1278-84.

PMID:
16117882
4.

Quadratic variance models for adaptively preprocessing SELDI-TOF mass spectrometry data.

Emanuele VA 2nd, Gurbaxani BM.

BMC Bioinformatics. 2010 Oct 13;11:512. doi: 10.1186/1471-2105-11-512.

5.

Reproducible cancer biomarker discovery in SELDI-TOF MS using different pre-processing algorithms.

Zou J, Hong G, Guo X, Zhang L, Yao C, Wang J, Guo Z.

PLoS One. 2011;6(10):e26294. doi: 10.1371/journal.pone.0026294. Epub 2011 Oct 14.

6.

Identification of lung cancer patients by serum protein profiling using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry.

Han KQ, Huang G, Gao CF, Wang XL, Ma B, Sun LQ, Wei ZJ.

Am J Clin Oncol. 2008 Apr;31(2):133-9. doi: 10.1097/COC.0b013e318145b98b.

PMID:
18391596
7.

Comparison of algorithms for pre-processing of SELDI-TOF mass spectrometry data.

Cruz-Marcelo A, Guerra R, Vannucci M, Li Y, Lau CC, Man TK.

Bioinformatics. 2008 Oct 1;24(19):2129-36. doi: 10.1093/bioinformatics/btn398. Epub 2008 Aug 11.

8.

Annotated regions of significance of SELDI-TOF-MS spectra for detecting protein biomarkers.

Tan CS, Ploner A, Quandt A, Lehtiƶ J, Pernemalm M, Lewensohn R, Pawitan Y.

Proteomics. 2006 Dec;6(23):6124-33.

PMID:
17072907
9.

Improving feature detection and analysis of surface-enhanced laser desorption/ionization-time of flight mass spectra.

Carlson SM, Najmi A, Whitin JC, Cohen HJ.

Proteomics. 2005 Jul;5(11):2778-88.

PMID:
15986333
11.

Proteomic data analysis workflow for discovery of candidate biomarker peaks predictive of clinical outcome for patients with acute myeloid leukemia.

Forshed J, Pernemalm M, Tan CS, Lindberg M, Kanter L, Pawitan Y, Lewensohn R, Stenke L, Lehtiƶ J.

J Proteome Res. 2008 Jun;7(6):2332-41. doi: 10.1021/pr070482e. Epub 2008 May 2.

PMID:
18452325
12.

Application of surface-enhanced laser desorption/ionization time-of-flight mass spectrometry coupled with an artificial neural network model for the diagnosis of hepatocellular carcinoma.

Hu Q, Huang Y, Wang Z, Tao H, Liu J, Yan L, Wang K.

Hepatogastroenterology. 2012 Sep;59(118):1902-6. doi: 10.5754/hge11771.

PMID:
22193438
13.

A novel preprocessing method using Hilbert Huang Transform for MALDI-TOF and SELDI-TOF mass spectrometry data.

Wu LC, Chen HH, Horng JT, Lin C, Huang NE, Cheng YC, Cheng KF.

PLoS One. 2010 Aug 31;5(8):e12493. doi: 10.1371/journal.pone.0012493.

14.

Identification of protein biomarkers in Dupuytren's contracture using surface enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI-TOF-MS).

O'Gorman D, Howard JC, Varallo VM, Cadieux P, Bowley E, McLean K, Pak BJ, Gan BS.

Clin Invest Med. 2006 Jun;29(3):136-45.

PMID:
17058431
15.

Application of serum SELDI proteomic patterns in diagnosis of lung cancer.

Yang SY, Xiao XY, Zhang WG, Zhang LJ, Zhang W, Zhou B, Chen G, He DC.

BMC Cancer. 2005 Jul 20;5:83.

16.
17.

Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. Assessment of platform reproducibility.

Semmes OJ, Feng Z, Adam BL, Banez LL, Bigbee WL, Campos D, Cazares LH, Chan DW, Grizzle WE, Izbicka E, Kagan J, Malik G, McLerran D, Moul JW, Partin A, Prasanna P, Rosenzweig J, Sokoll LJ, Srivastava S, Srivastava S, Thompson I, Welsh MJ, White N, Winget M, Yasui Y, Zhang Z, Zhu L.

Clin Chem. 2005 Jan;51(1):102-12.

18.

Multispectra CWT-based algorithm (MCWT) in mass spectra for peak extraction.

Hsueh HM, Kuo HC, Tsai CA.

J Biopharm Stat. 2008;18(5):869-82. doi: 10.1080/10543400802278064.

PMID:
18781522
19.

[Application of SELDI-TOF serum proteome profiling in cervical squamous cell carcinoma].

Xia T, Zheng ZG, Gao Y, Mou HZ, Xu SH, Zhang P, Zhu JQ.

Ai Zheng. 2008 Mar;27(3):279-82. Chinese.

PMID:
18334117
20.

Differential capture of serum proteins for expression profiling and biomarker discovery in pre- and posttreatment head and neck cancer samples.

Freed GL, Cazares LH, Fichandler CE, Fuller TW, Sawyer CA, Stack BC Jr, Schraff S, Semmes OJ, Wadsworth JT, Drake RR.

Laryngoscope. 2008 Jan;118(1):61-8.

PMID:
18043497
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